C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382353 FGF9-001 ENSG00000102678 9606 + 13:21671383-21704498 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382353
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382353 0.027±0.00 3.159±0.00 0.899±0.06 0.336±0.00 0.248±0.00 0.288±0.09 0.749±0.00 0.835±0.00 0.142±0.00 0.086±0.00 0.188±0.04 0.041±0.03 0.389±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MD CIL_0004MD_0001 CGP 13:21492691-21704498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001525 IEA angiogenesis
GO:0001649 IEA osteoblast differentiation
GO:0002053 IEA positive regulation of mesenchymal cell proliferation
GO:0002062 IEA chondrocyte differentiation
GO:0005104 IEA fibroblast growth factor receptor binding
GO:0005576 TAS extracellular region
GO:0005604 IEA basement membrane
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0006606 IEA protein import into nucleus
GO:0007165 TAS signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007267 IEA cell-cell signaling
GO:0008083 IEA growth factor activity
GO:0008201 IEA heparin binding
GO:0008284 IDA positive regulation of cell proliferation
GO:0008286 TAS insulin receptor signaling pathway
GO:0008543 IGI fibroblast growth factor receptor signaling pathway
GO:0008584 IEP male gonad development
GO:0010628 IEA positive regulation of gene expression
GO:0021762 IEP substantia nigra development
GO:0030178 IEA negative regulation of Wnt signaling pathway
GO:0030238 IEA male sex determination
GO:0030324 IEA lung development
GO:0030326 IEA embryonic limb morphogenesis
GO:0030949 IEA positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0032927 IEA positive regulation of activin receptor signaling pathway
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0042472 IEA inner ear morphogenesis
GO:0043410 IEA positive regulation of MAPK cascade
GO:0045087 TAS innate immune response
GO:0045880 IEA positive regulation of smoothened signaling pathway
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048015 TAS phosphatidylinositol-mediated signaling
GO:0048505 IEA regulation of timing of cell differentiation
GO:0048566 IEA embryonic digestive tract development
GO:0048706 IEA embryonic skeletal system development
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0051781 IEA positive regulation of cell division
GO:0060045 IEA positive regulation of cardiac muscle cell proliferation
GO:0060484 IEA lung-associated mesenchyme development
GO:0070062 IDA extracellular vesicular exosome
GO:0090263 IEA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022545 Fgf9-001 protein_coding Mus_musculus 0 1655
ENSMUST00000074654 Fgf9-002 protein_coding Mus_musculus 0 767
ENSMUST00000165526 Fgf9-003 protein_coding Mus_musculus 0 767
ENSMUST00000166770 Fgf9-004 protein_coding Mus_musculus 0 237

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