C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004MD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165487-ENSG00000102678 CGP 9606 13:21492691-21704498
GeneTranscriptPositionBiotype
ENSG00000102678 (FGF9)
fibroblast growth factor 9 		ENST00000382353 (FGF9-001) 21671383-21704498 protein_coding
ENST00000461657 (FGF9-002) 21674002-21701298 processed_transcript
ENST00000478546 (FGF9-003) 21681113-21701832 processed_transcript
ENSG00000165487 (MICU2)
mitochondrial calcium uptake 2 		ENST00000382374 (MICU2-001) 21492700-21604214 protein_coding
ENST00000460488 (MICU2-004) 21492937-21503098 processed_transcript
ENST00000468222 (MICU2-002) 21510083-21604181 protein_coding
ENST00000469058 (MICU2-005) 21510027-21604165 processed_transcript
ENST00000476895 (MICU2-006) 21510027-21603711 processed_transcript
ENST00000478700 (MICU2-003) 21493104-21496652 processed_transcript
ENST00000479790 (MICU2-008) 21492691-21503073 processed_transcript
ENST00000480341 (MICU2-007) 21502827-21515661 processed_transcript
ENSG00000226525 (RPS7P10)
ribosomal protein S7 pseudogene 10 		ENST00000464254 (RPS7P10-001) 21628413-21629015 processed_pseudogene
ENSG00000230022 (FNTAP2)
farnesyltransferase, CAAX box, alpha pseudogene 2 		ENST00000430308 (FNTAP2-001) 21530690-21531323 processed_pseudogene
CIL_0004MD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021973-ENSMUSG00000021974 CGP 10090 14:57916280-58112337
GeneTranscriptPositionBiotype
ENSMUSG00000021973 (Micu2)
mitochondrial calcium uptake 2 		ENSMUST00000022543 (Micu2-201) 57916280-57999262 protein_coding
ENSMUSG00000021974 (Fgf9)
fibroblast growth factor 9 		ENSMUST00000022545 (Fgf9-001) 58072686-58110174 protein_coding
ENSMUST00000074654 (Fgf9-002) 58075115-58110174 protein_coding
ENSMUST00000165526 (Fgf9-003) 58070547-58112337 protein_coding
ENSMUST00000166770 (Fgf9-004) 58076507-58109392 protein_coding
ENSMUSG00000091132 (Gm17109)
predicted gene 17109 		ENSMUST00000163985 (Gm17109-001) 58105772-58106129 processed_pseudogene
ENSMUSG00000097303 (3110083C13Rik)
RIKEN cDNA 3110083C13 gene 		ENSMUST00000180534 (3110083C13Rik-201) 57999323-58003695 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004MD_0001ENSG00000102678ENST00000382353ENST00000461657ENST00000478546ENSG00000165487ENST00000382374ENST00000460488ENST00000468222ENST00000469058ENST00000476895ENST00000478700ENST00000479790ENST00000480341ENSG00000226525ENST00000464254ENSG00000230022ENST00000430308CIL_0004MD_0002ENSMUSG00000021973ENSMUST00000022543ENSMUSG00000021974ENSMUST00000022545ENSMUST00000074654ENSMUST00000165526ENSMUST00000166770ENSMUSG00000091132ENSMUST00000163985ENSMUSG00000097303ENSMUST00000180534
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004MD_0001ENSG00000102678ENST00000382353ENST00000461657ENST00000478546ENSG00000165487ENST00000382374ENST00000460488ENST00000468222ENST00000469058ENST00000478700ENST00000479790ENSG00000226525ENST00000464254ENSG00000230022ENST00000430308CIL_0004MD_0002ENSMUSG00000021973ENSMUST00000022543ENSMUSG00000021974ENSMUST00000022545ENSMUST00000074654ENSMUST00000165526ENSMUST00000166770ENSMUSG00000091132ENSMUST00000163985ENSMUSG00000097303ENSMUST00000180534
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102678 ENST00000382353 N/A 0.027±0.00 3.159±0.00 0.899±0.06 0.336±0.00 0.248±0.00 0.288±0.09 0.749±0.00 0.835±0.00 0.142±0.00 0.086±0.00 0.188±0.04 0.041±0.03 0.389±0.09
ENST00000461657 N/A N/A N/A N/A 0.971±0.00 N/A N/A N/A N/A N/A 0.609±0.00 N/A 0.232±0.00 2.492±0.00
ENST00000478546 0.134±0.00 0.106±0.00 2.504±0.00 1.875±0.15 0.142±0.00 0.097±0.00 1.124±0.00 N/A N/A 0.385±0.00 N/A 0.535±0.17 0.044±0.02 1.653±0.00
ENSG00000165487 ENST00000382374 7.257±0.00 13.973±0.00 2.265±0.00 8.386±2.70 8.790±2.59 6.513±0.48 13.567±8.43 14.270±11.52 5.501±3.08 5.876±0.67 5.103±2.94 13.449±3.47 8.149±0.80 15.118±4.32
ENST00000460488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.599±0.00 10.152±0.00 11.736±0.00
ENST00000468222 N/A N/A N/A N/A N/A N/A N/A N/A 4.070±0.00 N/A 4.832±0.00 N/A N/A N/A
ENST00000469058 N/A N/A 1.824±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478700 N/A N/A 2.060±0.00 N/A N/A N/A N/A 1.400±0.00 N/A 1.854±0.00 1.000±0.00 12.448±0.00 N/A 13.060±0.00
ENST00000479790 N/A N/A N/A N/A N/A N/A N/A 1.159±0.00 0.735±0.00 N/A N/A 5.998±0.00 N/A N/A
ENST00000480341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226525 ENST00000464254 0.080±0.00 0.284±0.00 N/A 0.150±0.09 0.172±0.00 0.133±0.00 0.026±0.00 0.029±0.00 0.106±0.00 0.165±0.00 0.025±0.00 0.255±0.13 0.047±0.00 0.111±0.03
ENSG00000230022 ENST00000430308 N/A N/A 0.325±0.00 0.129±0.00 N/A N/A N/A 0.094±0.00 N/A N/A N/A 0.044±0.00 0.071±0.00 0.118±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021973 ENSMUST00000022543 12.817±4.58 45.062±2.42 17.860±0.92 10.216±5.20 15.415±8.16 31.731±12.18 12.523±1.53 14.618±2.23 11.682±2.21 17.437±9.86 12.771±1.07 23.840±7.84 13.151±2.63 4.652±0.56
ENSMUSG00000021974 ENSMUST00000022545 0.510±0.11 2.086±0.53 2.118±0.61 N/A 0.123±0.08 0.779±0.26 0.952±0.12 1.647±0.79 0.090±0.03 0.160±0.08 0.196±0.12 0.210±0.11 0.234±0.09 0.048±0.00
ENSMUST00000074654 0.206±0.00 N/A N/A 1.549±0.49 0.071±0.05 0.240±0.07 0.618±0.00 N/A 0.097±0.06 N/A N/A 0.326±0.00 0.128±0.00 0.107±0.00
ENSMUST00000165526 0.200±0.00 0.568±0.11 0.515±0.10 0.196±0.00 0.055±0.02 0.274±0.12 N/A 1.125±0.00 0.045±0.03 0.032±0.01 0.054±0.00 0.106±0.02 0.018±0.00 0.044±0.03
ENSMUST00000166770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.02
ENSMUSG00000091132 ENSMUST00000163985 N/A 0.365±0.03 0.040±0.00 0.085±0.05 N/A N/A 0.229±0.07 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097303 ENSMUST00000180534 0.350±0.12 0.551±0.31 0.277±0.07 1.266±0.54 0.654±0.19 0.294±0.15 0.250±0.13 0.684±0.43 0.204±0.13 0.459±0.05 0.326±0.21 1.065±0.40 1.214±0.37 5.537±1.92

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