C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dopachrome tautomerase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022725 Dct-201 ENSMUSG00000022129 10090 - 14:118012792-118052246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022725 0.374±0.30 0.216±0.05 0.128±0.01 1.171±0.88 0.520±0.24 0.209±0.12 0.685±0.24 0.092±0.05 0.139±0.16 0.085±0.04 0.140±0.08 0.136±0.11 0.161±0.19 1.430±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E8 CIL_0000E8_0002 CGP 14:116925297-118052246
CIL_000890 CIL_000890_0002 VISTA 14:117893836-118495430
CIL_0008KC CIL_0008KC_0002 VISTA 14:117929617-118531411
CIL_0000E7 CIL_0000E7_0002 CGP 14:118012792-118132765

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002052 IMP positive regulation of neuroblast proliferation
GO:0004167 IMP dopachrome isomerase activity
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006583 IDA melanin biosynthetic process from tyrosine
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0021847 IMP ventricular zone neuroblast division
GO:0042438 IMP melanin biosynthetic process
GO:0042470 IDA melanosome
GO:0043473 IMP pigmentation
GO:0046872 IEA metal ion binding
GO:0048066 IMP developmental pigmentation
GO:0048468 IMP cell development
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377028 DCT-001 protein_coding Homo_sapiens 0 1402
ENST00000446125 DCT-201 protein_coding Homo_sapiens 0 1122
ENST00000472871 DCT-002 retained_intron Homo_sapiens 0 514
ENST00000483392 DCT-003 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000490854 DCT-004 processed_transcript Homo_sapiens 0 372

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