C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000E8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183098-ENSG00000080166 CGP 9606 13:93226842-94479682
GeneTranscriptPositionBiotype
ENSG00000080166 (DCT)
dopachrome tautomerase 		ENST00000377028 (DCT-001) 94436808-94479669 protein_coding
ENST00000446125 (DCT-201) 94439589-94479682 protein_coding
ENST00000472871 (DCT-002) 94465457-94479669 retained_intron
ENST00000483392 (DCT-003) 94439487-94468770 nonsense_mediated_decay
ENST00000490854 (DCT-004) 94462121-94467955 processed_transcript
ENSG00000183098 (GPC6)
glypican 6 		ENST00000377047 (GPC6-001) 93226842-94407401 protein_coding
ENST00000617456 (GPC6-201) 94286348-94403217 protein_coding
ENSG00000224394 (GPC6-AS2)
GPC6 antisense RNA 2 		ENST00000445540 (GPC6-AS2-001) 93818424-93836144 antisense
ENSG00000235784 (HNRNPA1P29)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 29 		ENST00000426409 (HNRNPA1P29-001) 93394977-93395855 processed_pseudogene
ENSG00000236520 (GPC6-AS1)
GPC6 antisense RNA 1 		ENST00000436329 (GPC6-AS1-001) 94154193-94187991 antisense
CIL_0000E8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058571-ENSMUSG00000022129 CGP 10090 14:116925297-118052246
GeneTranscriptPositionBiotype
ENSMUSG00000022129 (Dct)
dopachrome tautomerase 		ENSMUST00000022725 (Dct-201) 118012792-118052246 protein_coding
ENSMUSG00000058571 (Gpc6)
glypican 6 		ENSMUST00000078849 (Gpc6-001) 116925297-117979529 protein_coding
ENSMUST00000088483 (Gpc6-004) 116925430-117976544 protein_coding
ENSMUST00000123239 (Gpc6-003) 116925315-117627198 retained_intron
ENSMUST00000125435 (Gpc6-002) 116925531-117975406 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E8_0001ENSG00000080166ENST00000377028ENST00000446125ENST00000472871ENST00000483392ENST00000490854ENSG00000183098ENST00000377047ENST00000617456ENSG00000224394ENST00000445540ENSG00000235784ENST00000426409ENSG00000236520ENST00000436329CIL_0000E8_0002ENSMUSG00000022129ENSMUST00000022725ENSMUSG00000058571ENSMUST00000078849ENSMUST00000088483ENSMUST00000123239ENSMUST00000125435
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E8_0001ENSG00000080166ENST00000377028ENST00000446125ENST00000472871ENST00000483392ENST00000490854ENSG00000183098ENST00000377047ENST00000617456ENSG00000224394ENST00000445540ENSG00000235784ENST00000426409ENSG00000236520ENST00000436329CIL_0000E8_0002ENSMUSG00000022129ENSMUST00000022725ENSMUSG00000058571ENSMUST00000078849ENSMUST00000088483ENSMUST00000125435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080166 ENST00000377028 N/A 0.040±0.00 N/A 0.237±0.08 0.029±0.00 0.040±0.00 N/A 0.046±0.04 N/A 0.103±0.06 0.032±0.00 0.094±0.05 0.008±0.00 0.128±0.00
ENST00000446125 N/A 0.052±0.00 0.204±0.00 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00
ENST00000472871 N/A N/A N/A 0.159±0.00 0.008±0.00 0.092±0.00 0.044±0.00 N/A 0.058±0.00 N/A 0.110±0.00 N/A N/A N/A
ENST00000483392 N/A N/A N/A 0.150±0.00 0.243±0.00 0.028±0.00 N/A N/A 0.169±0.00 N/A N/A 0.128±0.00 N/A 0.296±0.09
ENST00000490854 N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A
ENSG00000183098 ENST00000377047 0.976±0.00 1.589±0.00 1.885±0.00 0.829±0.11 2.559±0.49 3.705±1.33 0.475±0.03 4.153±1.13 3.424±0.00 1.887±0.44 0.213±0.17 3.378±1.93 0.282±0.07 1.862±1.48
ENST00000617456 N/A N/A N/A N/A N/A N/A 0.524±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224394 ENST00000445540 N/A N/A N/A N/A N/A 0.064±0.00 0.064±0.00 N/A N/A N/A N/A N/A N/A 0.152±0.10
ENSG00000235784 ENST00000426409 N/A 0.013±0.00 N/A 0.042±0.03 0.086±0.00 0.078±0.00 N/A 0.651±0.00 0.443±0.00 0.012±0.00 N/A 0.229±0.20 N/A N/A
ENSG00000236520 ENST00000436329 N/A N/A 0.569±0.00 N/A N/A N/A N/A 0.083±0.00 0.012±0.00 N/A N/A 0.053±0.02 N/A 0.055±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022129 ENSMUST00000022725 0.374±0.30 0.216±0.05 0.128±0.01 1.171±0.88 0.520±0.24 0.209±0.12 0.685±0.24 0.092±0.05 0.139±0.16 0.085±0.04 0.140±0.08 0.136±0.11 0.161±0.19 1.430±0.79
ENSMUSG00000058571 ENSMUST00000078849 3.469±0.61 1.919±0.60 13.079±1.56 2.854±1.64 3.898±1.33 1.340±0.16 1.747±0.65 1.892±0.37 1.143±1.00 0.903±0.36 N/A 3.859±2.55 1.094±0.52 0.160±0.07
ENSMUST00000088483 N/A N/A N/A N/A 1.629±0.10 0.656±0.20 N/A N/A N/A 0.449±0.00 N/A N/A 0.326±0.00 N/A
ENSMUST00000123239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125435 2.126±0.00 2.102±0.00 N/A N/A 1.500±0.00 0.455±0.06 N/A N/A N/A N/A N/A 0.906±0.00 N/A 0.160±0.07

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