C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysosomal-associated protein transmembrane 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022867 Laptm4b-201 ENSMUSG00000022257 10090 + 15:34238026-34284295 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022867 113.282±24.53 263.789±21.28 75.397±5.65 20.870±0.74 66.179±9.61 69.371±5.86 49.937±4.66 62.009±8.17 15.460±6.68 62.646±2.61 13.552±1.36 110.065±38.20 17.216±10.27 49.788±23.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KW CIL_0001KW_0002 CGP 15:34082694-34284295
CIL_0001KV CIL_0001KV_0002 CGP 15:34238026-34436242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000445593 LAPTM4B-001 protein_coding Homo_sapiens 0 832
ENST00000447781 AL591704.5-001 processed_pseudogene Homo_sapiens 0 564
ENST00000517924 LAPTM4B-003 protein_coding Homo_sapiens 0 455
ENST00000521545 LAPTM4B-002 protein_coding Homo_sapiens 0 824
ENST00000604542 RP11-728B21.3-001 processed_pseudogene Homo_sapiens 0 390
ENST00000619747 LAPTM4B-201 protein_coding Homo_sapiens 0 832

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