C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring-box 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023036 Rbx1-201 ENSMUSG00000022400 10090 + 15:81466316-81476369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023036 12.649±2.55 11.521±1.13 38.271±4.45 42.341±17.54 13.011±2.32 11.271±3.44 15.737±1.26 23.518±2.54 25.205±11.25 20.036±2.90 29.434±1.02 13.091±5.95 28.929±17.39 9.682±4.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065L CIL_00065L_0002 CGP 15:81406926-81476369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 TAS ubiquitin ligase complex
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005680 TAS anaphase-promoting complex
GO:0005829 IDA cytosol
GO:0006281 IEA DNA repair
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0006513 ISS protein monoubiquitination
GO:0008190 TAS eukaryotic initiation factor 4E binding
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex
GO:0019788 ISS NEDD8 ligase activity
GO:0030163 IMP protein catabolic process
GO:0030891 IEA VCB complex
GO:0031146 ISS SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031462 IEA Cul2-RING ubiquitin ligase complex
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0031464 ISS Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 ISS Cul4B-RING E3 ubiquitin ligase complex
GO:0031466 IEA Cul5-RING ubiquitin ligase complex
GO:0031467 ISS Cul7-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032403 IEA protein complex binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045116 ISS protein neddylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216225 RBX1-001 protein_coding Homo_sapiens 0 564
ENST00000476110 RBX1-003 retained_intron Homo_sapiens 0 401

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