C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023099 Slc38a2-201 ENSMUSG00000022462 10090 - 15:96687394-96699698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023099 14.688±7.42 21.998±8.30 16.163±1.80 16.079±5.80 8.592±5.10 21.942±8.32 21.895±8.40 7.777±4.73 11.426±6.03 9.001±0.74 21.893±7.43 18.063±10.23 38.366±19.87 3.077±1.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YO CIL_0005YO_0002 CGP 15:96571418-96699698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IDA amino acid transmembrane transport
GO:0005886 IDA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006865 IDA amino acid transport
GO:0015171 IDA amino acid transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256689 SLC38A2-001 protein_coding Homo_sapiens 0 2141
ENST00000547252 SLC38A2-006 processed_transcript Homo_sapiens 0 852
ENST00000548870 SLC38A2-007 processed_transcript Homo_sapiens 0 407
ENST00000549258 SLC38A2-002 nonsense_mediated_decay Homo_sapiens 0 1646
ENST00000551374 SLC38A2-003 protein_coding Homo_sapiens 0 1382
ENST00000551405 SLC38A2-005 processed_transcript Homo_sapiens 0 492
ENST00000612232 SLC38A2-201 protein_coding Homo_sapiens 0 874

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