C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256689 SLC38A2-001 ENSG00000134294 9606 - 12:46358189-46372867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256689
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256689 37.099±0.00 31.029±0.00 1.237±0.00 10.814±2.21 9.453±4.96 10.891±7.94 18.090±13.30 12.037±2.42 13.573±3.45 16.169±7.83 14.951±12.25 14.810±7.13 22.406±8.89 9.862±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YO CIL_0005YO_0001 CGP 12:46183063-46372867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006865 TAS amino acid transport
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0014047 TAS glutamate secretion
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023099 Slc38a2-201 protein_coding Mus_musculus 0 2141

Loading