C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) III (DNA directed) polypeptide H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023113 Polr3h-201 ENSMUSG00000022476 10090 - 15:81915030-81926213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENSMUST00000023113
Transcript ID Liver Placenta
ENSMUST00000023113 12.176±0.91 9.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065P CIL_00065P_0002 CGP 15:81865319-81915133
CIL_00065O CIL_00065O_0002 CGP 15:81872309-81926213
CIL_0000V8 CIL_0000V8_0003 CGP 15:81915030-81950941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0003899 ISS DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0005666 ISS DNA-directed RNA polymerase III complex
GO:0005813 IEA centrosome
GO:0006139 ISS nucleobase-containing compound metabolic process
GO:0006383 ISS transcription from RNA polymerase III promoter
GO:0006384 IBA transcription initiation from RNA polymerase III promoter
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045087 IEA innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337566 POLR3H-007 protein_coding Homo_sapiens 0 403
ENST00000355209 POLR3H-001 protein_coding Homo_sapiens 0 800
ENST00000396504 POLR3H-201 protein_coding Homo_sapiens 0 800
ENST00000407461 POLR3H-005 protein_coding Homo_sapiens 0 800
ENST00000420561 POLR3H-009 processed_transcript Homo_sapiens 2e-26 122
ENST00000431534 POLR3H-004 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000432789 POLR3H-006 nonsense_mediated_decay Homo_sapiens 0 656
ENST00000442616 POLR3H-008 nonsense_mediated_decay Homo_sapiens 8.99998e-41 171

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