C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte antigen 6 complex, locus H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023241 Ly6h-002 ENSMUSG00000022577 10090 - 15:75564747-75566657 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023241 6.040±0.61 3.532±0.40 0.088±0.04 79.703±21.90 2.204±0.81 0.271±0.06 0.038±0.01 0.063±0.02 0.167±0.10 0.141±0.04 0.178±0.00 4.354±2.64 0.117±0.06 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NV CIL_0002NV_0002 CGP 15:75449457-75567255
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0002NW CIL_0002NW_0002 CGP 15:75551268-75599481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342752 LY6H-001 protein_coding Homo_sapiens 0 641
ENST00000414417 LY6H-002 protein_coding Homo_sapiens 0 641
ENST00000430474 LY6H-003 protein_coding Homo_sapiens 0 645
ENST00000479685 LY6H-004 retained_intron Homo_sapiens 0 527
ENST00000610554 LY6H-202 protein_coding Homo_sapiens 0 645
ENST00000615409 LY6H-201 protein_coding Homo_sapiens 0 641
ENST00000615434 LY6H-203 protein_coding Homo_sapiens 0 641

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