C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E26 avian leukemia oncogene 2, 3' domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023612 Ets2-001 ENSMUSG00000022895 10090 + 16:95702075-95721051 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023612
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023612 7.790±0.81 13.061±0.72 10.263±5.60 4.764±2.28 14.552±4.32 37.778±2.98 7.754±2.35 9.356±3.70 4.958±2.00 36.250±17.56 5.714±3.08 19.685±4.77 50.923±10.06 0.462±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GI CIL_0003GI_0002 CGP 16:95359169-95721051
CIL_0007UB CIL_0007UB_0002 VISTA 16:95547910-96149564
CIL_0000XL CIL_0000XL_0002 CGP 16:95702075-95990960

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0035259 IEA glucocorticoid receptor binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360214 ETS2-001 protein_coding Homo_sapiens 0 1587
ENST00000360938 ETS2-002 protein_coding Homo_sapiens 0 1587
ENST00000432278 ETS2-003 protein_coding Homo_sapiens 0 553
ENST00000456966 ETS2-004 protein_coding Homo_sapiens 0 791

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