C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride intracellular channel 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023670 Clic6-001 ENSMUSG00000022949 10090 + 16:92498134-92541243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023670
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023670 0.485±0.16 0.134±0.07 0.123±0.00 3.344±1.00 1.466±0.38 7.783±1.21 0.270±0.26 2.114±0.31 0.179±0.12 6.589±0.27 0.040±0.03 0.542±0.17 6.629±8.12 0.615±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0002 VISTA 16:92040534-92642015
CIL_0007SX CIL_0007SX_0002 VISTA 16:92042784-92648394
CIL_0008OM CIL_0008OM_0002 VISTA 16:92044467-92645647
CIL_0008ZS CIL_0008ZS_0002 VISTA 16:92110151-92716672
CIL_00094R CIL_00094R_0002 VISTA 16:92127453-92730131
CIL_00078F CIL_00078F_0002 CGP 16:92485736-92826149

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008022 IEA protein C-terminus binding
GO:0008150 ND biological_process
GO:0031749 IEA D2 dopamine receptor binding
GO:0031750 IEA D3 dopamine receptor binding
GO:0031751 IEA D4 dopamine receptor binding
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042803 IEA protein homodimerization activity
GO:0044070 IEA regulation of anion transport
GO:0070062 IEA extracellular vesicular exosome
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349499 CLIC6-002 protein_coding Homo_sapiens 0 808
ENST00000360731 CLIC6-001 protein_coding Homo_sapiens 0 749

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