C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110004E09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023694 1110004E09Rik-001 ENSMUSG00000022972 10090 - 16:90925809-90934827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023694 2.924±0.47 7.190±0.45 12.903±0.73 18.113±7.33 1.351±0.82 1.339±0.22 3.767±0.57 5.389±1.19 7.055±5.77 2.868±0.65 14.714±0.86 8.604±7.17 11.317±5.60 31.939±5.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069
CIL_00087M CIL_00087M_0002 VISTA 16:90839145-91442270
CIL_0009BQ CIL_0009BQ_0002 VISTA 16:90840152-91441411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290155 C21orf59-001 protein_coding Homo_sapiens 0 869
ENST00000300260 C21orf59-003 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000382549 C21orf59-002 protein_coding Homo_sapiens 0 675
ENST00000431216 AP000275.65-003 protein_coding Homo_sapiens 0 643
ENST00000440966 C21orf59-006 protein_coding Homo_sapiens 0 676
ENST00000458138 C21orf59-007 protein_coding Homo_sapiens 0 405
ENST00000483315 C21orf59-008 retained_intron Homo_sapiens 0 335
ENST00000553001 AP000275.65-002 protein_coding Homo_sapiens 0 675

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