C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desert hedgehog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023737 Dhh-201 ENSMUSG00000023000 10090 - 15:98893031-98898540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023737 1.854±0.31 2.821±0.53 1.046±0.38 0.215±0.15 1.871±0.22 0.688±0.07 0.696±0.12 0.735±0.09 0.122±0.03 1.919±0.38 0.449±0.09 19.191±7.31 0.359±0.06 6.743±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000H CIL_00000H_0002 CGP 15:98877778-98898540
CIL_00000I CIL_00000I_0002 CGP 15:98893031-98918231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005113 IPI patched binding
GO:0005509 ISS calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0007267 IEA cell-cell signaling
GO:0007286 IMP spermatid development
GO:0008233 IEA peptidase activity
GO:0008270 ISS zinc ion binding
GO:0016539 IEA intein-mediated protein splicing
GO:0030238 IGI male sex determination
GO:0032355 IEA response to estradiol
GO:0033327 IMP Leydig cell differentiation
GO:0042552 IEA myelination
GO:0043627 IEA response to estrogen
GO:0050810 IGI regulation of steroid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266991 DHH-001 protein_coding Homo_sapiens 0 1578

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