C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00000I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139549-ENSG00000139636 CGP 9606 12:49089421-49110900
GeneTranscriptPositionBiotype
ENSG00000139549 (DHH)
desert hedgehog
ENST00000266991 (DHH-001) 49089421-49094819 protein_coding
ENSG00000139636 (LMBR1L)
limb development membrane protein 1-like
ENST00000267102 (LMBR1L-001) 49096551-49110898 protein_coding
ENST00000417750 (LMBR1L-002) 49097136-49110681 nonsense_mediated_decay
ENST00000457164 (LMBR1L-009) 49102353-49110850 nonsense_mediated_decay
ENST00000547382 (LMBR1L-005) 49097142-49110850 protein_coding
ENST00000547670 (LMBR1L-004) 49097700-49110877 nonsense_mediated_decay
ENST00000547675 (LMBR1L-019) 49102476-49110675 protein_coding
ENST00000547698 (LMBR1L-027) 49097145-49101549 protein_coding
ENST00000547813 (LMBR1L-024) 49097327-49101658 retained_intron
ENST00000548983 (LMBR1L-013) 49106691-49110847 processed_transcript
ENST00000549296 (LMBR1L-010) 49104499-49110850 nonsense_mediated_decay
ENST00000549429 (LMBR1L-025) 49100759-49101501 processed_transcript
ENST00000549587 (LMBR1L-017) 49104494-49105232 retained_intron
ENST00000549730 (LMBR1L-016) 49103103-49106080 retained_intron
ENST00000550137 (LMBR1L-030) 49104470-49110845 protein_coding
ENST00000550815 (LMBR1L-014) 49104751-49110677 nonsense_mediated_decay
ENST00000550867 (LMBR1L-006) 49097158-49110667 retained_intron
ENST00000551115 (LMBR1L-003) 49106423-49110884 retained_intron
ENST00000551143 (LMBR1L-021) 49098002-49102343 retained_intron
ENST00000551169 (LMBR1L-015) 49103081-49107011 nonsense_mediated_decay
ENST00000551272 (LMBR1L-026) 49097674-49100732 retained_intron
ENST00000551535 (LMBR1L-011) 49106589-49110900 retained_intron
ENST00000551782 (LMBR1L-012) 49104503-49110886 protein_coding
ENST00000551854 (LMBR1L-008) 49104474-49110205 protein_coding
ENST00000552141 (LMBR1L-020) 49101920-49103778 retained_intron
ENST00000552153 (LMBR1L-029) 49103687-49110871 processed_transcript
ENST00000552449 (LMBR1L-023) 49100600-49102176 protein_coding
ENST00000552577 (LMBR1L-007) 49097137-49104379 retained_intron
ENST00000552879 (LMBR1L-022) 49101103-49103120 retained_intron
ENST00000553040 (LMBR1L-028) 49097157-49102196 nonsense_mediated_decay
ENST00000553204 (LMBR1L-018) 49103701-49110693 processed_transcript
CIL_00000I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023000-ENSMUSG00000022999 CGP 10090 15:98893031-98918231
GeneTranscriptPositionBiotype
ENSMUSG00000022999 (Lmbr1l)
limb region 1 like
ENSMUST00000023736 (Lmbr1l-001) 98903921-98918231 protein_coding
ENSMUST00000109127 (Lmbr1l-002) 98903921-98916212 protein_coding
ENSMUST00000123950 (Lmbr1l-007) 98906179-98908937 processed_transcript
ENSMUST00000126159 (Lmbr1l-003) 98915176-98917750 processed_transcript
ENSMUST00000127548 (Lmbr1l-006) 98907182-98909263 retained_intron
ENSMUST00000128818 (Lmbr1l-004) 98913502-98918055 processed_transcript
ENSMUST00000135051 (Lmbr1l-005) 98907880-98909460 retained_intron
ENSMUSG00000023000 (Dhh)
desert hedgehog
ENSMUST00000023737 (Dhh-201) 98893031-98898540 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000I_0001ENSG00000139549ENST00000266991ENSG00000139636ENST00000267102ENST00000417750ENST00000547382ENST00000547698ENST00000549296ENST00000549429ENST00000549730ENST00000550867ENST00000551143ENST00000551272ENST00000551535ENST00000552141ENST00000552577ENST00000553040ENST00000553204CIL_00000I_0002ENSMUSG00000022999ENSMUST00000023736ENSMUST00000109127ENSMUST00000128818ENSMUSG00000023000ENSMUST00000023737
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139549 ENST00000266991 0.426±0.00 0.542±0.00 0.136±0.00 0.095±0.00 0.313±0.00 0.232±0.00 0.068±0.00 0.203±0.00 0.016±0.00 0.210±0.11 0.076±0.00 0.340±0.07 1.475±0.31 8.838±2.85
ENSG00000139636 ENST00000267102 N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A N/A
ENST00000417750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.976±0.00 N/A N/A 12.698±0.00
ENST00000457164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547382 1.710±0.00 N/A N/A N/A 2.530±0.00 2.769±0.00 N/A 2.411±0.00 2.130±0.00 4.858±0.00 1.308±0.00 7.538±0.86 9.212±4.33 12.040±0.00
ENST00000547670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547698 3.901±0.00 7.143±0.00 N/A N/A 6.420±0.00 4.965±0.00 3.178±0.00 6.849±0.00 3.549±0.00 N/A 1.526±0.00 N/A 8.405±0.00 22.615±0.00
ENST00000547813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.360±0.00 N/A N/A N/A
ENST00000549429 N/A N/A N/A N/A N/A N/A N/A 1.017±0.00 N/A N/A N/A 6.994±0.00 N/A N/A
ENST00000549587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549730 N/A N/A N/A 3.181±0.00 N/A N/A N/A N/A N/A N/A N/A 18.705±0.00 15.323±0.00 62.882±0.00
ENST00000550137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550867 1.270±0.00 3.520±0.00 N/A 2.291±0.00 N/A N/A 1.547±0.00 1.299±0.00 N/A N/A N/A 6.436±0.00 N/A N/A
ENST00000551115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.551±0.00 N/A N/A N/A
ENST00000551169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.627±0.00 N/A N/A N/A
ENST00000551535 N/A N/A N/A 1.012±0.00 2.753±0.00 1.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552141 N/A N/A N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A N/A 4.691±0.00 N/A N/A
ENST00000552153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552577 N/A 3.622±0.00 0.737±0.00 N/A 2.341±0.00 1.972±0.00 1.290±0.00 2.244±0.00 N/A 4.543±0.00 N/A 5.459±3.97 N/A N/A
ENST00000552879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553040 N/A N/A N/A N/A N/A 1.436±0.00 N/A N/A N/A N/A N/A N/A 8.698±0.00 N/A
ENST00000553204 N/A N/A N/A 1.525±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022999 ENSMUST00000023736 10.158±2.71 6.559±2.15 5.654±1.61 1.100±0.00 14.811±4.99 12.977±3.03 4.933±0.53 9.765±2.22 4.957±1.64 13.218±1.95 1.860±0.31 15.957±5.04 7.406±3.05 81.059±54.91
ENSMUST00000109127 N/A 2.568±0.70 N/A 0.352±0.00 N/A N/A N/A N/A N/A 2.857±0.00 0.750±0.10 2.627±1.11 3.030±0.00 N/A
ENSMUST00000123950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128818 N/A 25.822±7.02 N/A N/A 31.894±1.57 23.952±5.04 N/A N/A N/A N/A N/A 44.623±8.91 N/A N/A
ENSMUST00000135051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000023000 ENSMUST00000023737 1.854±0.31 2.821±0.53 1.046±0.38 0.215±0.15 1.871±0.22 0.688±0.07 0.696±0.12 0.735±0.09 0.122±0.03 1.919±0.38 0.449±0.09 19.191±7.31 0.359±0.06 6.743±1.27

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