C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desert hedgehog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266991 DHH-001 ENSG00000139549 9606 - 12:49089421-49094819 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266991 0.426±0.00 0.542±0.00 0.136±0.00 0.095±0.00 0.313±0.00 0.232±0.00 0.068±0.00 0.203±0.00 0.016±0.00 0.210±0.11 0.076±0.00 0.340±0.07 1.475±0.31 8.838±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000H CIL_00000H_0001 CGP 12:49064685-49094819
CIL_00000I CIL_00000I_0001 CGP 12:49089421-49110900

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005113 IEA patched binding
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0007154 IEA cell communication
GO:0007267 IEA cell-cell signaling
GO:0007275 IEA multicellular organismal development
GO:0007286 IEA spermatid development
GO:0008233 IEA peptidase activity
GO:0008270 IDA zinc ion binding
GO:0030238 IEA male sex determination
GO:0032355 IEA response to estradiol
GO:0033327 IEA Leydig cell differentiation
GO:0042552 IEA myelination
GO:0043627 IEA response to estrogen
GO:0050810 IEA regulation of steroid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023737 Dhh-201 protein_coding Mus_musculus 0 1578
ENSDART00000081760 ihhb-001 protein_coding Danio_rerio 0 243

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