C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regucalcin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023832 Rgn-001 ENSMUSG00000023070 10090 + X:20549787-20562089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023832
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023832 0.034±0.00 0.361±0.14 0.073±0.00 0.081±0.02 0.735±0.45 0.193±0.07 0.147±0.06 1.111±0.60 238.455±120.91 0.211±0.11 0.053±0.04 0.561±0.24 0.305±0.20 0.258±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G4 CIL_0005G4_0002 CGP X:20425688-20562089
CIL_0005GB CIL_0005GB_0002 CGP X:20549787-20617619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004341 ISS gluconolactonase activity
GO:0005509 ISS calcium ion binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006874 ISS cellular calcium ion homeostasis
GO:0008270 ISS zinc ion binding
GO:0019853 IDA L-ascorbic acid biosynthetic process
GO:0030234 IEA enzyme regulator activity
GO:0032781 ISS positive regulation of ATPase activity
GO:0050848 ISS regulation of calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336169 RGN-002 protein_coding Homo_sapiens 0 1009
ENST00000352078 RGN-001 protein_coding Homo_sapiens 0 1009
ENST00000397180 RGN-201 protein_coding Homo_sapiens 0 1009
ENST00000457380 RGN-202 protein_coding Homo_sapiens 0 420
ENST00000475448 RGN-003 processed_transcript Homo_sapiens 0 250

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