C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophan rich basic protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023913 Wrb-001 ENSMUSG00000023147 10090 + 16:96145407-96157852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023913 15.359±1.87 12.290±1.53 19.343±0.32 25.768±10.53 10.468±1.72 6.756±0.97 7.325±0.52 8.280±1.14 3.896±1.21 10.783±0.62 1.938±0.69 15.376±6.26 9.100±1.31 6.202±2.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UB CIL_0007UB_0002 VISTA 16:95547910-96149564
CIL_0003GM CIL_0003GM_0002 CGP 16:96120618-96157852
CIL_0003GP CIL_0003GP_0002 CGP 16:96145407-96192257

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0071816 IEA tail-anchored membrane protein insertion into ER membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333781 WRB-001 protein_coding Homo_sapiens 0 571
ENST00000380708 WRB-004 protein_coding Homo_sapiens 0 523
ENST00000380713 WRB-009 protein_coding Homo_sapiens 0 435
ENST00000398753 WRB-002 protein_coding Homo_sapiens 0 521
ENST00000466787 WRB-006 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000471468 WRB-008 retained_intron Homo_sapiens 0 272
ENST00000487869 WRB-005 retained_intron Homo_sapiens 0 344
ENST00000490860 WRB-007 retained_intron Homo_sapiens 0 237
ENST00000623703 WRB-019 nonsense_mediated_decay Homo_sapiens 0 484

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