C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement factor H-related 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023965 Cfhr1-001 ENSMUSG00000057037 10090 - 1:139547062-139560258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000023965
Transcript ID Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000023965 0.009±0.00 0.025±0.00 0.203±0.05 25.264±23.15 0.041±0.01 0.242±0.15 0.479±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_000A CGP 1:139501707-139560258

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320493 CFHR1-001 protein_coding Homo_sapiens 2e-31 141
ENST00000367415 CFHR2-001 protein_coding Homo_sapiens 0 412
ENST00000367421 CFHR2-001 protein_coding Homo_sapiens 0 412
ENST00000367424 CFHR1-002 protein_coding Homo_sapiens 0 416
ENST00000367429 CFH-001 protein_coding Homo_sapiens 1e-32 147
ENST00000466229 CFH-004 retained_intron Homo_sapiens 2e-32 147
ENST00000473386 CFHR2-002 processed_transcript Homo_sapiens 3e-36 156
ENST00000476712 CFHR2-005 protein_coding Homo_sapiens 2.99878e-43 180
ENST00000496448 CFHR2-006 processed_transcript Homo_sapiens 0 235

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