C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement factor H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367429 CFH-001 ENSG00000000971 9606 + 1:196651878-196747504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367429 14.962±0.00 18.053±0.00 1.717±0.00 2.725±1.20 17.084±0.91 11.486±6.49 6.578±4.45 135.198±124.29 108.702±93.99 14.523±3.05 1.632±0.40 30.474±23.05 7.115±1.98 10.343±6.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_0003 CGP 1:196651878-196795406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 TAS extracellular space
GO:0006956 TAS complement activation
GO:0006957 IEA complement activation, alternative pathway
GO:0008201 IDA heparin binding
GO:0030449 TAS regulation of complement activation
GO:0043395 IDA heparan sulfate proteoglycan binding
GO:0045087 TAS innate immune response
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023965 Cfhr1-001 protein_coding Mus_musculus 1e-32 147
ENSMUST00000161224 Cfhr1-003 retained_intron Mus_musculus 3e-28 132

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