C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP-GLY domain containing linker protein family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024854 Clip4-201 ENSMUSG00000024059 10090 + 17:71781947-71858351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000024854
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000024854 1.175±0.90 4.443±0.12 2.922±1.12 7.187±3.95 1.188±0.43 39.610±7.26 1.566±0.82 0.086±0.04 7.300±3.21 16.231±1.83 2.276±1.60 0.152±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013S CIL_00013S_0002 CGP 17:71743557-71858351
CIL_00013T CIL_00013T_0002 CGP 17:71781947-72603709

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320081 CLIP4-001 protein_coding Homo_sapiens 0 1903
ENST00000401605 CLIP4-003 protein_coding Homo_sapiens 0 1622
ENST00000401617 CLIP4-004 protein_coding Homo_sapiens 0 1563
ENST00000404424 CLIP4-005 protein_coding Homo_sapiens 0 1901
ENST00000415891 CLIP4-007 nonsense_mediated_decay Homo_sapiens 0 1223
ENST00000438819 CLIP4-011 protein_coding Homo_sapiens 0 560
ENST00000449202 CLIP4-009 protein_coding Homo_sapiens 0 717
ENST00000456385 CLIP4-006 nonsense_mediated_decay Homo_sapiens 0 795

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