C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024887 Ndufaf7-201 ENSMUSG00000024082 10090 + 17:78937135-78948052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024887 4.455±1.89 3.025±1.01 8.768±0.71 4.383±1.51 4.332±0.65 4.150±0.74 6.748±0.44 9.262±0.56 3.633±1.18 3.441±0.94 3.870±1.11 5.297±1.31 4.068±1.57 2.280±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0002 VISTA 17:78844758-79446183
CIL_0002IL CIL_0002IL_0002 CGP 17:78919006-78948052
CIL_0008VK CIL_0008VK_0002 VISTA 17:78923077-79528513
CIL_0002IK CIL_0002IK_0002 CGP 17:78937135-79020816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005739 IDA mitochondrion
GO:0019899 IEA enzyme binding
GO:0032981 ISS mitochondrial respiratory chain complex I assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000002125 NDUFAF7-001 protein_coding Homo_sapiens 0 1356
ENST00000336237 NDUFAF7-004 protein_coding Homo_sapiens 0 662
ENST00000416653 NDUFAF7-007 protein_coding Homo_sapiens 0 462
ENST00000419278 NDUFAF7-014 processed_transcript Homo_sapiens 0 401
ENST00000431821 NDUFAF7-006 protein_coding Homo_sapiens 0 701
ENST00000432075 NDUFAF7-013 protein_coding Homo_sapiens 0 560
ENST00000439218 NDUFAF7-010 protein_coding Homo_sapiens 0 920
ENST00000455230 NDUFAF7-011 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000469831 NDUFAF7-008 retained_intron Homo_sapiens 0 616
ENST00000474154 NDUFAF7-002 retained_intron Homo_sapiens 0 623
ENST00000474257 NDUFAF7-003 retained_intron Homo_sapiens 0 734
ENST00000483999 NDUFAF7-009 processed_transcript Homo_sapiens 0 507

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