C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008VK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2097 VISTA 9606 2:37223010-37826535
GeneTranscriptPositionBiotype
ENSG00000115816 (CEBPZ)
CCAAT/enhancer binding protein (C/EBP), zeta 		ENST00000234170 (CEBPZ-001) 37201612-37231713 protein_coding
ENST00000446769 (CEBPZ-002) 37228608-37231369 protein_coding
ENST00000489306 (CEBPZ-003) 37201784-37212108 retained_intron
ENST00000619061 (CEBPZ-201) 37201723-37231579 protein_coding
ENSG00000115825 (PRKD3)
protein kinase D3 		ENST00000234179 (PRKD3-201) 37250505-37317079 protein_coding
ENST00000379066 (PRKD3-001) 37250502-37317894 protein_coding
ENST00000443187 (PRKD3-004) 37286232-37324808 protein_coding
ENST00000443977 (PRKD3-007) 37260356-37274604 protein_coding
ENST00000452104 (PRKD3-008) 37256698-37272423 protein_coding
ENST00000464552 (PRKD3-005) 37292988-37316388 retained_intron
ENST00000469275 (PRKD3-003) 37256662-37279390 retained_intron
ENST00000475912 (PRKD3-006) 37282306-37290962 retained_intron
ENST00000477132 (PRKD3-009) 37316814-37324370 processed_transcript
ENST00000494667 (PRKD3-002) 37267565-37317023 retained_intron
ENSG00000115828 (QPCT)
glutaminyl-peptide cyclotransferase 		ENST00000338415 (QPCT-001) 37344574-37373322 protein_coding
ENST00000404976 (QPCT-004) 37344594-37372742 protein_coding
ENST00000444022 (QPCT-006) 37368281-37372799 protein_coding
ENST00000469098 (QPCT-005) 37367123-37373030 retained_intron
ENST00000470075 (QPCT-002) 37344728-37360053 retained_intron
ENST00000480050 (QPCT-003) 37358712-37369702 retained_intron
ENSG00000163171 (CDC42EP3)
CDC42 effector protein (Rho GTPase binding) 3 		ENST00000295324 (CDC42EP3-001) 37641889-37672191 protein_coding
ENST00000422687 (CDC42EP3-005) 37646546-37647658 protein_coding
ENST00000453555 (CDC42EP3-006) 37646484-37738468 protein_coding
ENST00000457889 (CDC42EP3-002) 37645941-37672199 protein_coding
ENST00000494083 (CDC42EP3-007) 37684483-37688849 retained_intron
ENST00000611976 (CDC42EP3-201) 37641882-37672535 protein_coding
ENSG00000225402 (AC010878.3)
 ENST00000456500 (AC010878.3-001) 37816915-37817961 processed_pseudogene
ENSG00000232028 (AC007391.2)
 ENST00000433893 (AC007391.2-001) 37325340-37326797 lincRNA
ENSG00000236572 (AC006369.3)
 ENST00000431712 (AC006369.3-001) 37744333-37747046 lincRNA
ENSG00000237803 (LINC00211)
long intergenic non-protein coding RNA 211 		ENST00000413792 (LINC00211-003) 37826247-37829432 lincRNA
ENST00000418746 (LINC00211-001) 37840038-37876274 lincRNA
ENST00000446799 (LINC00211-002) 37827609-37875863 lincRNA
ENSG00000276630 (AC007391.1)
 ENST00000617132 (AC007391.1-201) 37458573-37458659 miRNA
CIL_0008VK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2097 VISTA 10090 17:78923077-79528513
GeneTranscriptPositionBiotype
ENSMUSG00000024070 (Prkd3)
protein kinase D3 		ENSMUST00000003191 (Prkd3-001) 78949405-79013306 protein_coding
ENSMUST00000118768 (Prkd3-004) 78951641-79008505 protein_coding
ENSMUST00000118991 (Prkd3-005) 78971555-78985448 protein_coding
ENSMUST00000119284 (Prkd3-002) 78950549-79020816 protein_coding
ENSMUST00000124229 (Prkd3-006) 78969619-78985448 retained_intron
ENSMUST00000130070 (Prkd3-007) 79010127-79020777 retained_intron
ENSMUST00000146917 (Prkd3-003) 78972276-79008688 processed_transcript
ENSMUST00000168887 (Prkd3-201) 78949405-79020816 protein_coding
ENSMUSG00000024081 (Cebpz)
CCAAT/enhancer binding protein zeta 		ENSMUST00000024885 (Cebpz-201) 78919006-78937070 protein_coding
ENSMUSG00000024082 (Ndufaf7)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7 		ENSMUST00000024887 (Ndufaf7-201) 78937135-78948052 protein_coding
ENSMUSG00000024084 (Qpct)
glutaminyl-peptide cyclotransferase (glutaminyl cyclase) 		ENSMUST00000040789 (Qpct-201) 79051906-79090243 protein_coding
ENSMUSG00000036533 (Cdc42ep3)
CDC42 effector protein (Rho GTPase binding) 3 		ENSMUST00000068958 (Cdc42ep3-201) 79334025-79355091 protein_coding
ENSMUSG00000097791 (Gm17315)
predicted gene, 17315 		ENSMUST00000181408 (Gm17315-201) 79354699-79358022 lincRNA
ENSMUSG00000098114 (Gm26957)
predicted gene, 26957 		ENSMUST00000182645 (Gm26957-001) 79041946-79042922 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008VK_0001ENSG00000115816ENST00000234170ENST00000619061ENSG00000115825ENST00000234179ENST00000379066ENST00000494667ENSG00000115828ENST00000338415ENST00000404976ENST00000469098ENST00000470075ENST00000480050ENSG00000163171ENST00000295324ENST00000457889ENST00000611976ENSG00000225402ENST00000456500ENSG00000232028ENST00000433893ENSG00000236572ENST00000431712ENSG00000237803ENST00000413792ENST00000418746ENST00000446799ENSG00000276630ENST00000617132CIL_0008VK_0002ENSMUSG00000024070ENSMUST00000003191ENSMUST00000118768ENSMUST00000118991ENSMUST00000119284ENSMUST00000124229ENSMUST00000168887ENSMUSG00000024081ENSMUST00000024885ENSMUSG00000024082ENSMUST00000024887ENSMUSG00000024084ENSMUST00000040789ENSMUSG00000036533ENSMUST00000068958ENSMUSG00000097791ENSMUST00000181408ENSMUSG00000098114ENSMUST00000182645
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115816 ENST00000234170 N/A N/A 1.854±0.00 5.092±0.00 4.500±0.00 4.997±1.94 7.189±0.00 3.589±0.00 3.664±0.14 6.326±0.00 8.576±0.00 10.779±5.07 2.534±0.46 15.441±0.00
ENST00000446769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619061 10.000±0.00 N/A N/A N/A N/A N/A 2.011±0.00 N/A N/A 7.267±1.84 3.626±1.68 11.399±6.65 7.286±4.89 26.860±6.95
ENSG00000115825 ENST00000234179 6.684±0.00 N/A N/A 3.401±0.00 4.644±0.86 4.194±1.60 3.215±0.00 N/A 1.942±0.00 4.613±0.00 2.704±0.00 3.600±0.00 1.627±0.39 13.294±0.00
ENST00000379066 N/A N/A N/A N/A 3.798±0.00 N/A 2.300±0.00 N/A N/A 6.742±4.87 N/A 4.106±0.00 1.355±0.08 N/A
ENST00000443187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494667 N/A N/A 2.601±0.00 N/A 4.597±0.00 N/A N/A N/A 3.423±0.00 N/A N/A N/A N/A N/A
ENSG00000115828 ENST00000338415 3.566±0.00 3.673±0.00 N/A 4.020±3.00 0.859±0.62 11.313±0.00 0.364±0.32 4.620±0.00 0.967±0.00 1.870±1.52 N/A 3.305±2.90 4.999±0.70 2.976±2.67
ENST00000404976 N/A N/A N/A N/A N/A N/A 0.280±0.00 1.452±0.00 N/A 2.170±0.00 1.044±0.00 N/A N/A 0.210±0.00
ENST00000444022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469098 N/A N/A 0.088±0.00 N/A N/A 0.164±0.00 N/A N/A 0.787±0.00 0.654±0.00 N/A N/A N/A N/A
ENST00000470075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.468±0.00 N/A N/A
ENST00000480050 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A 0.396±0.00
ENSG00000163171 ENST00000295324 21.593±0.00 5.097±0.00 0.783±0.00 0.921±0.40 3.849±0.28 4.127±2.47 6.672±3.61 3.442±3.16 5.975±5.74 7.345±4.84 5.358±3.98 5.526±2.79 4.302±0.35 4.901±3.79
ENST00000422687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457889 36.753±0.00 N/A N/A N/A N/A 16.147±0.00 N/A 11.058±0.00 1.014±0.00 33.999±0.00 N/A 11.761±2.37 7.321±0.32 20.525±0.00
ENST00000494083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611976 N/A N/A N/A 0.826±0.00 N/A 1.369±0.00 1.958±0.00 N/A N/A N/A 2.568±0.00 N/A N/A N/A
ENSG00000225402 ENST00000456500 0.021±0.00 N/A N/A 0.054±0.00 0.010±0.00 0.078±0.00 0.071±0.00 0.032±0.00 0.009±0.00 N/A 0.028±0.00 N/A N/A 0.021±0.00
ENSG00000232028 ENST00000433893 N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A 1.613±0.37
ENSG00000236572 ENST00000431712 N/A 0.021±0.00 N/A N/A N/A N/A 0.021±0.00 0.039±0.00 N/A 0.015±0.00 N/A 0.055±0.00 N/A N/A
ENSG00000237803 ENST00000413792 0.051±0.00 0.103±0.00 N/A N/A 0.024±0.00 0.029±0.00 0.027±0.01 N/A N/A 0.199±0.10 N/A 0.005±0.00 0.086±0.00 N/A
ENST00000418746 N/A N/A N/A N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A 0.184±0.00
ENST00000446799 N/A N/A N/A 0.219±0.00 0.085±0.00 N/A N/A 0.052±0.00 0.046±0.00 0.373±0.00 0.023±0.00 0.061±0.00 0.042±0.00 0.305±0.00
ENSG00000276630 ENST00000617132 N/A 0.668±0.00 N/A 1.766±0.00 1.735±0.00 1.226±0.00 0.643±0.00 N/A 1.559±0.00 3.494±0.00 N/A N/A N/A 1.510±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024070 ENSMUST00000003191 4.010±1.17 1.458±0.53 2.638±0.00 1.674±1.12 4.765±0.80 1.286±0.60 1.142±0.28 2.070±1.17 2.607±0.98 6.927±1.68 0.755±0.18 4.936±1.80 3.297±1.75 0.619±0.17
ENSMUST00000118768 N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118991 N/A N/A N/A N/A N/A N/A N/A N/A 18.473±2.29 N/A N/A N/A N/A N/A
ENSMUST00000119284 3.565±1.63 1.789±0.69 N/A N/A 2.614±0.89 0.970±0.34 0.895±0.26 1.347±0.04 3.419±0.00 4.609±0.29 0.312±0.00 5.933±1.76 2.083±0.55 0.676±0.28
ENSMUST00000124229 N/A N/A N/A N/A N/A N/A N/A N/A 22.708±8.63 N/A N/A N/A N/A N/A
ENSMUST00000130070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168887 N/A N/A N/A 0.251±0.00 N/A 0.470±0.00 0.996±0.00 N/A 1.710±0.00 N/A 0.291±0.00 N/A 1.799±1.38 N/A
ENSMUSG00000024081 ENSMUST00000024885 1.583±0.32 1.005±0.50 1.635±0.16 6.427±5.58 1.001±0.21 0.631±0.17 1.254±0.30 1.729±0.54 1.994±1.08 1.960±0.80 4.533±0.61 4.440±3.73 14.729±14.71 3.948±4.87
ENSMUSG00000024082 ENSMUST00000024887 4.455±1.89 3.025±1.01 8.768±0.71 4.383±1.51 4.332±0.65 4.150±0.74 6.748±0.44 9.262±0.56 3.633±1.18 3.441±0.94 3.870±1.11 5.297±1.31 4.068±1.57 2.280±0.25
ENSMUSG00000024084 ENSMUST00000040789 12.125±4.00 1.901±0.23 10.972±1.45 3.324±0.71 8.951±1.53 8.802±2.07 3.162±0.39 1.599±0.28 12.234±6.17 4.503±0.14 0.579±0.14 5.104±1.67 2.622±1.02 14.165±5.62
ENSMUSG00000036533 ENSMUST00000068958 9.604±1.38 1.860±0.52 65.721±13.35 5.093±1.34 5.431±0.80 8.181±2.14 8.098±2.01 7.981±0.87 6.498±7.23 10.539±3.38 11.758±2.81 5.607±1.66 7.679±4.27 25.556±13.97
ENSMUSG00000097791 ENSMUST00000181408 N/A 1.311±0.49 N/A N/A N/A N/A N/A N/A 0.056±0.01 N/A N/A 1.449±0.00 N/A N/A
ENSMUSG00000098114 ENSMUST00000182645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.05

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