C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000003509-ENSG00000115825 CGP 9606 2:37231631-37324808
GeneTranscriptPositionBiotype
ENSG00000115816 (CEBPZ)
CCAAT/enhancer binding protein (C/EBP), zeta 		ENST00000234170 (CEBPZ-001) 37201612-37231713 protein_coding
ENST00000446769 (CEBPZ-002) 37228608-37231369 protein_coding
ENST00000489306 (CEBPZ-003) 37201784-37212108 retained_intron
ENST00000619061 (CEBPZ-201) 37201723-37231579 protein_coding
ENSG00000115825 (PRKD3)
protein kinase D3 		ENST00000234179 (PRKD3-201) 37250505-37317079 protein_coding
ENST00000379066 (PRKD3-001) 37250502-37317894 protein_coding
ENST00000443187 (PRKD3-004) 37286232-37324808 protein_coding
ENST00000443977 (PRKD3-007) 37260356-37274604 protein_coding
ENST00000452104 (PRKD3-008) 37256698-37272423 protein_coding
ENST00000464552 (PRKD3-005) 37292988-37316388 retained_intron
ENST00000469275 (PRKD3-003) 37256662-37279390 retained_intron
ENST00000475912 (PRKD3-006) 37282306-37290962 retained_intron
ENST00000477132 (PRKD3-009) 37316814-37324370 processed_transcript
ENST00000494667 (PRKD3-002) 37267565-37317023 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0002IK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024082-ENSMUSG00000024070 CGP 10090 17:78937135-79020816
GeneTranscriptPositionBiotype
ENSMUSG00000024070 (Prkd3)
protein kinase D3 		ENSMUST00000003191 (Prkd3-001) 78949405-79013306 protein_coding
ENSMUST00000118768 (Prkd3-004) 78951641-79008505 protein_coding
ENSMUST00000118991 (Prkd3-005) 78971555-78985448 protein_coding
ENSMUST00000119284 (Prkd3-002) 78950549-79020816 protein_coding
ENSMUST00000124229 (Prkd3-006) 78969619-78985448 retained_intron
ENSMUST00000130070 (Prkd3-007) 79010127-79020777 retained_intron
ENSMUST00000146917 (Prkd3-003) 78972276-79008688 processed_transcript
ENSMUST00000168887 (Prkd3-201) 78949405-79020816 protein_coding
ENSMUSG00000024082 (Ndufaf7)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7 		ENSMUST00000024887 (Ndufaf7-201) 78937135-78948052 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IK_0001ENSG00000115816ENST00000234170ENST00000446769ENST00000489306ENST00000619061ENSG00000115825ENST00000234179ENST00000379066ENST00000443187ENST00000443977ENST00000452104ENST00000464552ENST00000469275ENST00000475912ENST00000477132ENST00000494667CIL_0002IK_0002ENSMUSG00000024070ENSMUST00000003191ENSMUST00000118768ENSMUST00000118991ENSMUST00000119284ENSMUST00000124229ENSMUST00000130070ENSMUST00000146917ENSMUST00000168887ENSMUSG00000024082ENSMUST00000024887
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IK_0001ENSG00000115816ENST00000234170ENST00000619061ENSG00000115825ENST00000234179ENST00000379066ENST00000494667CIL_0002IK_0002ENSMUSG00000024070ENSMUST00000003191ENSMUST00000118768ENSMUST00000118991ENSMUST00000119284ENSMUST00000124229ENSMUST00000168887ENSMUSG00000024082ENSMUST00000024887
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115816 ENST00000234170 N/A N/A 1.854±0.00 5.092±0.00 4.500±0.00 4.997±1.94 7.189±0.00 3.589±0.00 3.664±0.14 6.326±0.00 8.576±0.00 10.779±5.07 2.534±0.46 15.441±0.00
ENST00000446769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619061 10.000±0.00 N/A N/A N/A N/A N/A 2.011±0.00 N/A N/A 7.267±1.84 3.626±1.68 11.399±6.65 7.286±4.89 26.860±6.95
ENSG00000115825 ENST00000234179 6.684±0.00 N/A N/A 3.401±0.00 4.644±0.86 4.194±1.60 3.215±0.00 N/A 1.942±0.00 4.613±0.00 2.704±0.00 3.600±0.00 1.627±0.39 13.294±0.00
ENST00000379066 N/A N/A N/A N/A 3.798±0.00 N/A 2.300±0.00 N/A N/A 6.742±4.87 N/A 4.106±0.00 1.355±0.08 N/A
ENST00000443187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494667 N/A N/A 2.601±0.00 N/A 4.597±0.00 N/A N/A N/A 3.423±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024070 ENSMUST00000003191 4.010±1.17 1.458±0.53 2.638±0.00 1.674±1.12 4.765±0.80 1.286±0.60 1.142±0.28 2.070±1.17 2.607±0.98 6.927±1.68 0.755±0.18 4.936±1.80 3.297±1.75 0.619±0.17
ENSMUST00000118768 N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118991 N/A N/A N/A N/A N/A N/A N/A N/A 18.473±2.29 N/A N/A N/A N/A N/A
ENSMUST00000119284 3.565±1.63 1.789±0.69 N/A N/A 2.614±0.89 0.970±0.34 0.895±0.26 1.347±0.04 3.419±0.00 4.609±0.29 0.312±0.00 5.933±1.76 2.083±0.55 0.676±0.28
ENSMUST00000124229 N/A N/A N/A N/A N/A N/A N/A N/A 22.708±8.63 N/A N/A N/A N/A N/A
ENSMUST00000130070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168887 N/A N/A N/A 0.251±0.00 N/A 0.470±0.00 0.996±0.00 N/A 1.710±0.00 N/A 0.291±0.00 N/A 1.799±1.38 N/A
ENSMUSG00000024082 ENSMUST00000024887 4.455±1.89 3.025±1.01 8.768±0.71 4.383±1.51 4.332±0.65 4.150±0.74 6.748±0.44 9.262±0.56 3.633±1.18 3.441±0.94 3.870±1.11 5.297±1.31 4.068±1.57 2.280±0.25

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