C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 178
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025092 Tmem178-201 ENSMUSG00000024245 10090 + 17:80944632-81001816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025092 0.464±0.18 7.301±1.26 0.348±0.04 23.128±16.85 0.310±0.09 0.148±0.08 0.121±0.03 12.312±2.02 0.197±0.08 11.907±2.24 0.185±0.08 16.146±4.28 0.422±0.39 0.173±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TC CIL_0003TC_0003 CGP 17:80580512-81001816
CIL_00066V CIL_00066V_0002 CGP 17:80944632-81065085

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281961 TMEM178A-001 protein_coding Homo_sapiens 0 1788
ENST00000413011 TMEM178A-004 processed_transcript Homo_sapiens 0 599
ENST00000482239 TMEM178A-003 processed_transcript Homo_sapiens 0 725
ENST00000495402 TMEM178A-005 processed_transcript Homo_sapiens 0 420
ENST00000618232 TMEM178A-201 protein_coding Homo_sapiens 0 499

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