C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152154-ENSG00000138050 CGP 9606 2:39664982-39779267
GeneTranscriptPositionBiotype
ENSG00000138050 (THUMPD2)
THUMP domain containing 2 		ENST00000378727 (THUMPD2-002) 39736307-39779267 nonsense_mediated_decay
ENST00000403537 (THUMPD2-003) 39768903-39779239 processed_transcript
ENST00000460072 (THUMPD2-004) 39736060-39770013 retained_intron
ENST00000505747 (THUMPD2-001) 39736305-39779267 protein_coding
ENST00000510781 (THUMPD2-006) 39761332-39779152 nonsense_mediated_decay
ENST00000527689 (THUMPD2-008) 39761365-39766212 retained_intron
ENST00000530095 (THUMPD2-009) 39736683-39744654 retained_intron
ENST00000530522 (THUMPD2-005) 39736610-39779221 nonsense_mediated_decay
ENST00000531687 (THUMPD2-007) 39770017-39779240 processed_transcript
ENSG00000152154 (TMEM178A)
transmembrane protein 178A 		ENST00000281961 (TMEM178A-001) 39665919-39717963 protein_coding
ENST00000413011 (TMEM178A-004) 39687307-39717209 processed_transcript
ENST00000437068 (TMEM178A-002) 39664982-39707136 processed_transcript
ENST00000482239 (TMEM178A-003) 39665498-39717450 processed_transcript
ENST00000495402 (TMEM178A-005) 39697813-39717093 processed_transcript
ENST00000618232 (TMEM178A-201) 39665967-39717956 protein_coding
ENSG00000231312 (AC007246.3)
 ENST00000366187 (AC007246.3-011) 39453839-39454726 antisense
ENST00000415640 (AC007246.3-001) 39518639-39665343 antisense
ENST00000422128 (AC007246.3-005) 39437402-39584648 antisense
ENST00000425775 (AC007246.3-007) 39516866-39599477 antisense
ENST00000426083 (AC007246.3-003) 39436637-39604076 antisense
ENST00000438649 (AC007246.3-004) 39514146-39599539 antisense
ENST00000443038 (AC007246.3-010) 39437369-39516768 antisense
ENST00000445520 (AC007246.3-009) 39437431-39474758 antisense
ENST00000446698 (AC007246.3-008) 39453922-39624356 antisense
ENST00000449569 (AC007246.3-002) 39437416-39601344 antisense
ENST00000451547 (AC007246.3-006) 39518675-39599539 antisense
CIL_00066V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024245-ENSMUSG00000024246 CGP 10090 17:80944632-81065085
GeneTranscriptPositionBiotype
ENSMUSG00000024245 (Tmem178)
transmembrane protein 178 		ENSMUST00000025092 (Tmem178-201) 80944632-81001816 protein_coding
ENSMUSG00000024246 (Thumpd2)
THUMP domain containing 2 		ENSMUST00000025093 (Thumpd2-201) 81026327-81065085 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066V_0001ENSG00000138050ENST00000378727ENST00000403537ENST00000460072ENST00000505747ENST00000510781ENST00000527689ENST00000530095ENST00000530522ENST00000531687ENSG00000152154ENST00000281961ENST00000413011ENST00000437068ENST00000482239ENST00000495402ENST00000618232ENSG00000231312ENST00000366187ENST00000415640ENST00000422128ENST00000425775ENST00000426083ENST00000438649ENST00000443038ENST00000445520ENST00000446698ENST00000449569ENST00000451547CIL_00066V_0002ENSMUSG00000024245ENSMUST00000025092ENSMUSG00000024246ENSMUST00000025093
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066V_0001ENSG00000138050ENST00000378727ENST00000403537ENST00000460072ENST00000505747ENST00000510781ENST00000530095ENST00000530522ENSG00000152154ENST00000281961ENST00000437068ENST00000618232ENSG00000231312ENST00000366187ENST00000422128ENST00000445520ENST00000449569CIL_00066V_0002ENSMUSG00000024245ENSMUST00000025092ENSMUSG00000024246ENSMUST00000025093
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138050 ENST00000378727 0.732±0.00 0.972±0.00 N/A 0.282±0.00 0.413±0.00 1.088±0.00 0.609±0.00 1.020±0.00 0.462±0.00 0.380±0.00 0.583±0.00 2.016±0.89 0.637±0.20 0.680±0.00
ENST00000403537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.467±0.00 N/A
ENST00000460072 N/A 0.363±0.00 0.316±0.00 0.722±0.31 0.191±0.00 0.260±0.00 0.117±0.00 0.366±0.00 0.248±0.00 0.438±0.00 N/A 0.842±0.24 N/A 0.420±0.00
ENST00000505747 N/A 0.724±0.00 N/A 0.961±0.02 0.868±0.00 0.761±0.00 0.576±0.28 1.489±0.00 0.620±0.19 0.690±0.00 N/A 1.694±0.21 N/A 1.905±0.00
ENST00000510781 N/A N/A 0.281±0.00 0.531±0.00 N/A N/A 0.158±0.00 0.593±0.00 N/A N/A N/A 2.345±0.00 0.688±0.00 0.752±0.00
ENST00000527689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530095 N/A N/A N/A N/A N/A N/A N/A 1.360±0.00 N/A N/A 0.525±0.00 N/A N/A N/A
ENST00000530522 0.211±0.00 N/A 0.363±0.00 N/A N/A 0.352±0.00 N/A N/A N/A N/A 0.250±0.00 0.900±0.00 0.647±0.00 N/A
ENST00000531687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152154 ENST00000281961 N/A 0.481±0.00 N/A 17.846±7.62 4.253±0.00 1.256±0.00 N/A 9.135±0.00 N/A 1.804±0.00 N/A 2.669±0.81 2.160±0.92 N/A
ENST00000413011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437068 N/A N/A N/A N/A N/A N/A N/A N/A 0.999±0.00 N/A N/A N/A N/A N/A
ENST00000482239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618232 N/A N/A N/A N/A N/A 0.969±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231312 ENST00000366187 N/A N/A N/A N/A 3.398±0.00 N/A N/A N/A N/A N/A N/A 2.638±0.00 N/A N/A
ENST00000415640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422128 N/A N/A 5.497±0.00 12.271±0.00 N/A N/A 1.797±0.00 N/A 1.935±0.00 N/A 1.488±0.00 3.701±0.00 N/A N/A
ENST00000425775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445520 6.699±0.00 1.777±0.00 N/A N/A 3.950±2.12 N/A 3.363±0.00 N/A 6.449±0.00 3.960±0.00 1.597±0.23 26.456±0.00 9.750±6.02 8.131±0.00
ENST00000446698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449569 1.091±0.00 N/A 0.389±0.00 1.954±0.86 0.756±0.06 0.594±0.00 0.431±0.25 1.074±0.30 0.461±0.00 0.874±0.07 0.350±0.00 0.832±0.61 0.871±0.43 0.747±0.17
ENST00000451547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024245 ENSMUST00000025092 0.464±0.18 7.301±1.26 0.348±0.04 23.128±16.85 0.310±0.09 0.148±0.08 0.121±0.03 12.312±2.02 0.197±0.08 11.907±2.24 0.185±0.08 16.146±4.28 0.422±0.39 0.173±0.06
ENSMUSG00000024246 ENSMUST00000025093 0.843±0.33 1.227±0.73 1.932±0.19 1.369±0.29 0.670±0.32 0.970±0.26 0.676±0.16 1.114±0.30 1.594±0.95 0.832±0.46 0.570±0.08 2.691±1.31 1.476±0.16 0.352±0.08

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