C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein cytoplasmic 2 light intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025101 Dync2li1-201 ENSMUSG00000024253 10090 + 17:84626496-84655558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025101 4.355±2.39 0.760±0.18 10.406±0.21 8.122±0.50 1.003±0.34 0.903±0.29 1.500±0.35 10.590±1.51 0.870±0.89 6.917±1.45 1.759±0.50 7.797±8.12 4.154±1.43 10.414±3.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BS CIL_0004BS_0002 CGP 17:84511895-84655558
CIL_0001XP CIL_0001XP_0002 CGP 17:84626496-84683011

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005874 IEA microtubule
GO:0005930 IDA axoneme
GO:0007368 IMP determination of left/right symmetry
GO:0008152 IEA metabolic process
GO:0030286 IEA dynein complex
GO:0030990 IDA intraciliary transport particle
GO:0031512 IDA motile primary cilium
GO:0042384 IMP cilium assembly
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260605 DYNC2LI1-001 protein_coding Homo_sapiens 0 1031
ENST00000378587 DYNC2LI1-004 protein_coding Homo_sapiens 0 922
ENST00000398823 DYNC2LI1-003 protein_coding Homo_sapiens 5e-40 171
ENST00000406852 DYNC2LI1-002 protein_coding Homo_sapiens 0 507
ENST00000462426 DYNC2LI1-009 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000479242 DYNC2LI1-007 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000489222 DYNC2LI1-008 processed_transcript Homo_sapiens 0 564
ENST00000605786 DYNC2LI1-010 protein_coding Homo_sapiens 0 1022

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