C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein, cytoplasmic 2, light intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406852 DYNC2LI1-002 ENSG00000138036 9606 + 2:43774049-43795179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungOvaryENST00000406852
Transcript ID Bladder Brain Breast Colon Heart Lung Ovary
ENST00000406852 1.670±0.00 1.491±0.00 2.089±0.00 0.962±0.00 0.179±0.00 1.482±0.00 2.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BS CIL_0004BS_0001 CGP 2:43637273-43810010
CIL_0001XP CIL_0001XP_0001 CGP 2:43774039-43838865

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005858 ISS axonemal dynein complex
GO:0005881 ISS cytoplasmic microtubule
GO:0005930 ISS axoneme
GO:0008152 IEA metabolic process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030990 ISS intraciliary transport particle
GO:0031512 ISS motile primary cilium
GO:0036064 ISS ciliary basal body
GO:0045177 ISS apical part of cell
GO:0072372 ISS primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025101 Dync2li1-201 protein_coding Mus_musculus 0 507

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