C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongator acetyltransferase complex subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025120 Elp2-201 ENSMUSG00000024271 10090 + 18:24603961-24638830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025120 20.895±10.61 11.526±1.53 24.751±3.94 40.457±10.58 13.441±1.75 4.921±1.86 7.097±1.06 16.514±1.63 14.146±6.37 16.163±1.25 6.585±0.54 20.000±9.99 29.387±11.10 9.011±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000T CIL_00000T_0002 CGP 18:24579881-24638830
CIL_00000L CIL_00000L_0002 CGP 18:24603961-24701556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 ISS proteasome complex
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006368 ISS transcription elongation from RNA polymerase II promoter
GO:0008023 ISO transcription elongation factor complex
GO:0010950 ISS positive regulation of endopeptidase activity
GO:0019901 IDA protein kinase binding
GO:0033588 ISS Elongator holoenzyme complex
GO:0043248 ISS proteasome assembly
GO:0046425 IDA regulation of JAK-STAT cascade
GO:0061133 ISS endopeptidase activator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350494 ELP2-005 protein_coding Homo_sapiens 0 1013
ENST00000351393 ELP2-006 protein_coding Homo_sapiens 0 1594
ENST00000358232 ELP2-001 protein_coding Homo_sapiens 0 1932
ENST00000423854 ELP2-003 protein_coding Homo_sapiens 0 1461
ENST00000442325 ELP2-004 protein_coding Homo_sapiens 0 1594
ENST00000535093 ELP2-018 processed_transcript Homo_sapiens 0 527
ENST00000539560 ELP2-002 nonsense_mediated_decay Homo_sapiens 0 1613
ENST00000540766 ELP2-021 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000541748 ELP2-026 retained_intron Homo_sapiens 0 331
ENST00000542824 ELP2-007 protein_coding Homo_sapiens 0 1013
ENST00000545302 ELP2-025 processed_transcript Homo_sapiens 0 259

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