C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongator acetyltransferase complex subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423854 ELP2-003 ENSG00000134759 9606 + 18:36129899-36174720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungMusclePlacentaTestisENST00000423854
Transcript ID Adipose Colon Liver Lung Muscle Placenta Testis
ENST00000423854 4.047±0.00 4.573±0.00 5.654±0.00 3.849±1.13 4.444±0.00 2.435±0.00 5.785±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000T CIL_00000T_0001 CGP 18:36108532-36180556
CIL_00000L CIL_00000L_0001 CGP 18:36129444-36272157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IEA protein binding
GO:0005730 IC nucleolus
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006368 IC transcription elongation from RNA polymerase II promoter
GO:0008023 IDA transcription elongation factor complex
GO:0016591 IC DNA-directed RNA polymerase II, holoenzyme
GO:0033588 IDA Elongator holoenzyme complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025120 Elp2-201 protein_coding Mus_musculus 0 1461

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