C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025217 Hspa9-001 ENSMUSG00000024359 10090 - 18:34937414-34954357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025217 54.337±2.97 272.215±21.97 48.365±0.52 45.905±19.91 55.222±8.08 31.701±2.25 91.906±6.74 90.474±7.70 87.380±10.29 26.214±1.34 100.546±16.30 67.190±27.65 108.772±46.50 40.743±5.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DB CIL_0005DB_0002 CGP 18:34902785-34954357
CIL_0005DA CIL_0005DA_0002 CGP 18:34937414-35254773

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005925 IEA focal adhesion
GO:0006457 IEA protein folding
GO:0006611 IDA protein export from nucleus
GO:0019899 IPI enzyme binding
GO:0042645 IEA mitochondrial nucleoid
GO:0044822 IEA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297185 HSPA9-001 protein_coding Homo_sapiens 0 2898
ENST00000432228 HSPA9P1-001 processed_pseudogene Homo_sapiens 0 2386
ENST00000504810 HSPA9-010 protein_coding Homo_sapiens 0 529
ENST00000504902 HSPA9-008 nonsense_mediated_decay Homo_sapiens 0 1055
ENST00000505110 HSPA9-004 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000507097 HSPA9-002 retained_intron Homo_sapiens 0 1917
ENST00000507115 HSPA9-003 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000508003 HSPA9-006 retained_intron Homo_sapiens 0 580
ENST00000512328 HSPA9-007 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000523929 HSPA9-013 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000524109 HSPA9-014 retained_intron Homo_sapiens 0 555

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