C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 2 (within H-2S)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025230 C2-001 ENSMUSG00000024371 10090 - 17:34862605-34882100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025230
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025230 29.547±1.97 53.934±3.76 31.422±8.99 25.358±5.31 2.789±0.26 2.082±0.26 33.064±3.22 28.654±15.18 15.280±1.90 0.752±0.20 26.800±2.58 9.737±7.73 5.631±1.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PM CIL_0001PM_0004 CGP 17:34856374-34882042
CIL_000421 CIL_000421_0002 CGP 17:34862604-34898265

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0006958 IEA complement activation, classical pathway
GO:0007584 IEA response to nutrient
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome
GO:2000427 IEA positive regulation of apoptotic cell clearance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299367 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000375510 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000383177 C2-003 protein_coding Homo_sapiens 0 917
ENST00000383359 C2-003 protein_coding Homo_sapiens 0 917
ENST00000383362 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000383367 C2-003 protein_coding Homo_sapiens 0 917
ENST00000411803 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000413548 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000415985 C2-010 protein_coding Homo_sapiens 0 804
ENST00000416252 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000416456 C2-010 protein_coding Homo_sapiens 0 804
ENST00000417322 C2-010 protein_coding Homo_sapiens 0 804
ENST00000419062 C2-003 protein_coding Homo_sapiens 0 917
ENST00000421932 C2-010 protein_coding Homo_sapiens 0 804
ENST00000423826 C2-003 protein_coding Homo_sapiens 0 917
ENST00000428140 C2-003 protein_coding Homo_sapiens 0 917
ENST00000428349 C2-010 protein_coding Homo_sapiens 0 804
ENST00000435104 C2-010 protein_coding Homo_sapiens 0 804
ENST00000442278 C2-010 protein_coding Homo_sapiens 0 1284
ENST00000448206 C2-001 protein_coding Homo_sapiens 0 1531
ENST00000452323 C2-014 protein_coding Homo_sapiens 0 917
ENST00000452763 C2-003 protein_coding Homo_sapiens 0 917
ENST00000456570 CFB-001 protein_coding Homo_sapiens 0 789
ENST00000460487 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000461900 C2-012 processed_transcript Homo_sapiens 0 392
ENST00000466838 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000468407 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000469372 C2-017 protein_coding Homo_sapiens 0 1013
ENST00000469807 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000472803 C2-005 retained_intron Homo_sapiens 0 787
ENST00000474222 C2-012 processed_transcript Homo_sapiens 0 392
ENST00000475544 C2-004 processed_transcript Homo_sapiens 0 1005
ENST00000476210 C2-004 processed_transcript Homo_sapiens 0 1005
ENST00000477310 CFB-002 protein_coding Homo_sapiens 0 479
ENST00000477630 C2-012 processed_transcript Homo_sapiens 0 392
ENST00000482060 C2-018 nonsense_mediated_decay Homo_sapiens 0 1480
ENST00000482418 C2-005 retained_intron Homo_sapiens 0 787
ENST00000483332 C2-005 retained_intron Homo_sapiens 0 787
ENST00000484209 C2-005 retained_intron Homo_sapiens 0 787
ENST00000485098 C2-005 retained_intron Homo_sapiens 0 787
ENST00000485544 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000485690 C2-012 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000486124 C2-005 retained_intron Homo_sapiens 0 787
ENST00000486761 C2-005 retained_intron Homo_sapiens 0 787
ENST00000489229 C2-004 processed_transcript Homo_sapiens 0 1005
ENST00000490020 C2-012 processed_transcript Homo_sapiens 0 392
ENST00000490080 C2-012 processed_transcript Homo_sapiens 0 392
ENST00000491080 C2-004 processed_transcript Homo_sapiens 0 1005
ENST00000491097 C2-004 processed_transcript Homo_sapiens 0 1005
ENST00000491566 C2-012 processed_transcript Homo_sapiens 0 392
ENST00000492777 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000495674 C2-013 processed_transcript Homo_sapiens 0 344
ENST00000497706 C2-004 protein_coding Homo_sapiens 0 891
ENST00000498138 C2-004 processed_transcript Homo_sapiens 0 1005
ENST00000547984 C2-204 protein_coding Homo_sapiens 0 1480
ENST00000548250 C2-201 protein_coding Homo_sapiens 0 1013
ENST00000548500 C2-220 protein_coding Homo_sapiens 0 1013
ENST00000548828 C2-202 protein_coding Homo_sapiens 0 1480
ENST00000548973 C2-205 protein_coding Homo_sapiens 0 1284
ENST00000548995 C2-203 protein_coding Homo_sapiens 0 1284
ENST00000549972 C2-221 protein_coding Homo_sapiens 0 1284
ENST00000549997 C2-212 protein_coding Homo_sapiens 0 1480
ENST00000550045 C2-222 protein_coding Homo_sapiens 0 1480
ENST00000550363 C2-216 protein_coding Homo_sapiens 0 1480
ENST00000550682 C2-213 protein_coding Homo_sapiens 0 1284
ENST00000551081 C2-217 protein_coding Homo_sapiens 0 1284
ENST00000551648 C2-208 protein_coding Homo_sapiens 0 1284
ENST00000552638 C2-209 protein_coding Homo_sapiens 0 1480
ENST00000612228 C2-214 protein_coding Homo_sapiens 0 917
ENST00000613837 C2-210 protein_coding Homo_sapiens 0 1013
ENST00000614291 C2-218 protein_coding Homo_sapiens 0 1013
ENST00000615380 C2-211 protein_coding Homo_sapiens 0 917
ENST00000615801 C2-206 protein_coding Homo_sapiens 0 1013
ENST00000618254 C2-219 protein_coding Homo_sapiens 0 917
ENST00000618948 C2-215 protein_coding Homo_sapiens 0 1013
ENST00000621558 C2-207 protein_coding Homo_sapiens 0 917

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