C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydropyrimidinase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025379 Dpysl3-002 ENSMUSG00000024501 10090 - 18:43324288-43393377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungOvaryENSMUST00000025379
Transcript ID Adrenal Brain Breast Colon Liver Lung Ovary
ENSMUST00000025379 1.842±0.59 114.483±8.59 3.820±0.79 3.901±0.86 0.225±0.00 4.011±0.09 15.718±4.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GA CIL_0001GA_0003 CGP 18:43207697-43438286

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 ISS extracellular space
GO:0005829 ISS cytosol
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0007399 IDA nervous system development
GO:0008152 IEA metabolic process
GO:0010976 ISS positive regulation of neuron projection development
GO:0010977 ISS negative regulation of neuron projection development
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0017124 ISS SH3 domain binding
GO:0030027 ISS lamellipodium
GO:0030336 ISS negative regulation of cell migration
GO:0030426 ISS growth cone
GO:0031941 ISS filamentous actin
GO:0035374 ISS chondroitin sulfate binding
GO:0044297 ISS cell body
GO:0048666 IEA neuron development
GO:0048678 ISS response to axon injury
GO:0051017 ISS actin filament bundle assembly
GO:0051219 IPI phosphoprotein binding
GO:0051260 ISS protein homooligomerization
GO:0051491 ISS positive regulation of filopodium assembly
GO:0051764 ISS actin crosslink formation
GO:0070382 ISS exocytic vesicle
GO:0071345 ISS cellular response to cytokine stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000044597 dpysl4-201 protein_coding Danio_rerio 0.0000002 62
ENSDART00000148628 dpysl4-001 nonsense_mediated_decay Danio_rerio 0.0000002 62
ENSDART00000149579 dpysl4-003 protein_coding Danio_rerio 0.0000002 62
ENST00000343218 DPYSL3-003 protein_coding Homo_sapiens 0 2263
ENST00000398514 DPYSL3-001 protein_coding Homo_sapiens 0 2593
ENST00000507309 DPYSL3-005 processed_transcript Homo_sapiens 0 558
ENST00000508042 DPYSL3-006 retained_intron Homo_sapiens 0 374
ENST00000512722 DPYSL3-004 protein_coding Homo_sapiens 0 558
ENST00000519672 DPYSL3-007 processed_transcript Homo_sapiens 0 446
ENST00000520473 DPYSL3-009 protein_coding Homo_sapiens 0 516
ENST00000523458 DPYSL3-008 nonsense_mediated_decay Homo_sapiens 0 527

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