C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydropyrimidinase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343218 DPYSL3-003 ENSG00000113657 9606 - 5:147390812-147510056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000343218
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000343218 5.373±0.00 8.892±0.00 4.635±0.25 14.216±2.50 11.761±6.36 3.831±1.69 35.056±0.00 10.136±3.78 0.922±0.00 24.263±9.31 3.548±1.71 2.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GA CIL_0001GA_0002 CGP 5:147234963-147510056
CIL_0001GB CIL_0001GB_0002 CGP 5:147390811-147782848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 ISS extracellular space
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0007399 IEA nervous system development
GO:0007411 TAS axon guidance
GO:0010976 ISS positive regulation of neuron projection development
GO:0010977 ISS negative regulation of neuron projection development
GO:0016787 IEA hydrolase activity
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0017124 ISS SH3 domain binding
GO:0030027 ISS lamellipodium
GO:0030336 ISS negative regulation of cell migration
GO:0030426 ISS growth cone
GO:0031941 ISS filamentous actin
GO:0035374 ISS chondroitin sulfate binding
GO:0044297 ISS cell body
GO:0048666 IEA neuron development
GO:0048678 ISS response to axon injury
GO:0051017 ISS actin filament bundle assembly
GO:0051219 IEA phosphoprotein binding
GO:0051260 ISS protein homooligomerization
GO:0051491 ISS positive regulation of filopodium assembly
GO:0051764 ISS actin crosslink formation
GO:0070382 ISS exocytic vesicle
GO:0071345 ISS cellular response to cytokine stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121805 Dpysl3-001 protein_coding Mus_musculus 0 3151
ENSMUST00000118043 Dpysl3-003 protein_coding Mus_musculus 0 2303
ENSMUST00000025379 Dpysl3-002 protein_coding Mus_musculus 0 2263
ENSMUST00000124207 Dpysl3-004 protein_coding Mus_musculus 0 874
ENSDART00000124867 dpysl3-201 protein_coding Danio_rerio 0 780
ENSDART00000065097 dpysl3-001 protein_coding Danio_rerio 0 780
ENSMUST00000118071 Dpysl3-005 protein_coding Mus_musculus 0 399
ENSDART00000138329 dpysl3-002 protein_coding Danio_rerio 3e-39 169

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