C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydropyrimidinase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398514 DPYSL3-001 ENSG00000113657 9606 - 5:147390811-147453959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungENST00000398514
Transcript ID Brain Breast Colon Lung
ENST00000398514 0.964±0.00 6.201±0.00 1.738±0.00 2.406±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GA CIL_0001GA_0002 CGP 5:147234963-147510056
CIL_0001GB CIL_0001GB_0002 CGP 5:147390811-147782848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 ISS extracellular space
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0007411 TAS axon guidance
GO:0008152 IEA metabolic process
GO:0010976 ISS positive regulation of neuron projection development
GO:0010977 ISS negative regulation of neuron projection development
GO:0016787 IEA hydrolase activity
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0017124 ISS SH3 domain binding
GO:0030027 ISS lamellipodium
GO:0030336 ISS negative regulation of cell migration
GO:0030426 ISS growth cone
GO:0031941 ISS filamentous actin
GO:0035374 ISS chondroitin sulfate binding
GO:0044297 ISS cell body
GO:0048678 ISS response to axon injury
GO:0051017 ISS actin filament bundle assembly
GO:0051260 ISS protein homooligomerization
GO:0051491 ISS positive regulation of filopodium assembly
GO:0051764 ISS actin crosslink formation
GO:0070382 ISS exocytic vesicle
GO:0071345 ISS cellular response to cytokine stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121805 Dpysl3-001 protein_coding Mus_musculus 0 2699
ENSMUST00000025379 Dpysl3-002 protein_coding Mus_musculus 0 2593
ENSMUST00000118043 Dpysl3-003 protein_coding Mus_musculus 0 2302
ENSMUST00000124207 Dpysl3-004 protein_coding Mus_musculus 0 874
ENSDART00000065097 dpysl3-001 protein_coding Danio_rerio 0 821
ENSDART00000124867 dpysl3-201 protein_coding Danio_rerio 0 780
ENSMUST00000118071 Dpysl3-005 protein_coding Mus_musculus 0 399
ENSDART00000138329 dpysl3-002 protein_coding Danio_rerio 1e-38 167

Loading