C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025511 Rps14-001 ENSMUSG00000024608 10090 + 18:60774510-60778546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025511
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025511 193.672±65.56 23.687±0.00 760.021±107.05 344.126±90.77 110.951±9.56 148.951±39.03 106.592±2.56 174.313±48.77 524.077±499.37 167.332±16.62 235.100±55.12 213.125±178.41 589.278±214.09 167.425±19.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0002 VISTA 18:60604549-61207221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000028 ISS ribosomal small subunit assembly
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003723 ISS RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0006417 IEA regulation of translation
GO:0016020 IEA membrane
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0030218 IEA erythrocyte differentiation
GO:0030490 ISS maturation of SSU-rRNA
GO:0044822 IEA poly(A) RNA binding
GO:0045182 IEA translation regulator activity
GO:0048027 IEA mRNA 5'-UTR binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053208 rps14-201 protein_coding Danio_rerio 0 492
ENST00000312037 RPS14-005 protein_coding Homo_sapiens 0 680
ENST00000401695 RPS14-001 protein_coding Homo_sapiens 0 732
ENST00000404250 RP4-570O12.2-001 processed_pseudogene Homo_sapiens 0 344
ENST00000407193 RPS14-201 protein_coding Homo_sapiens 0 682
ENST00000455621 RP4-765C7.2-001 processed_pseudogene Homo_sapiens 0 414
ENST00000457263 RPS14P3-001 processed_pseudogene Homo_sapiens 0 564
ENST00000518139 RPS14-004 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000519690 RPS14-002 retained_intron Homo_sapiens 0 462
ENST00000519855 RPS14-007 protein_coding Homo_sapiens 0 294
ENST00000521466 RPS14-006 protein_coding Homo_sapiens 0 680
ENST00000567734 RP11-483K5.2-001 processed_pseudogene Homo_sapiens 0 387

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