C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567734 RP11-483K5.2-001 ENSG00000260379 9606 + 16:8508069-8508585 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLungMuscleTestisENST00000567734
Transcript ID Adipose Adrenal Brain Kidney Lung Muscle Testis
ENST00000567734 0.075±0.00 0.119±0.00 0.131±0.00 0.080±0.00 0.038±0.00 0.276±0.00 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EP CIL_0000EP_0001 CGP 16:6019094-8590193
CIL_0008RJ CIL_0008RJ_0001 VISTA 16:8081301-8682556
CIL_0007RL CIL_0007RL_0001 VISTA 16:8108831-8709719

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122279 Rps14-005 protein_coding Mus_musculus 0 387
ENSMUST00000118551 Rps14-002 protein_coding Mus_musculus 0 387
ENSMUST00000025511 Rps14-001 protein_coding Mus_musculus 0 387
ENSMUST00000137400 Rps14-004 protein_coding Mus_musculus 0 372
ENSMUST00000072779 Gm5805-201 processed_pseudogene Mus_musculus 0 353
ENSMUST00000127568 Rps14-003 protein_coding Mus_musculus 0 337
ENSMUST00000142980 Rps14-006 retained_intron Mus_musculus 0 307
ENSMUST00000164671 Gm17450-201 pseudogene Mus_musculus 0 287
ENSMUST00000121286 Gm13551-001 processed_pseudogene Mus_musculus 0 213

Loading