C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium/calmodulin-dependent protein kinase II alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025519 Camk2a-002 ENSMUSG00000024617 10090 + 18:60925632-60986407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverOvaryENSMUST00000025519
Transcript ID Adrenal Brain Colon Liver Ovary
ENSMUST00000025519 0.175±0.03 2.809±1.60 0.519±0.13 0.040±0.05 0.313±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0002 VISTA 18:60604549-61207221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0002931 IMP response to ischemia
GO:0004674 IMP protein serine/threonine kinase activity
GO:0004683 IEA calmodulin-dependent protein kinase activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005739 IMP mitochondrion
GO:0006816 IMP calcium ion transport
GO:0010666 IMP positive regulation of cardiac muscle cell apoptotic process
GO:0018105 IMP peptidyl-serine phosphorylation
GO:0035254 IPI glutamate receptor binding
GO:0046777 IMP protein autophosphorylation
GO:0046928 IMP regulation of neurotransmitter secretion
GO:0048168 IMP regulation of neuronal synaptic plasticity
GO:0051928 IMP positive regulation of calcium ion transport
GO:1902108 IMP regulation of mitochondrial membrane permeability involved in apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000039571 camk2a-201 protein_coding Danio_rerio 0 1070
ENSDART00000150983 camk2a-001 protein_coding Danio_rerio 0 704
ENST00000305762 CAMK2G-005 protein_coding Homo_sapiens 0 625
ENST00000322635 CAMK2G-001 protein_coding Homo_sapiens 0 610
ENST00000322680 CAMK2G-201 protein_coding Homo_sapiens 0 610
ENST00000348628 CAMK2A-001 protein_coding Homo_sapiens 0 1552
ENST00000351010 CAMK2A-003 processed_transcript Homo_sapiens 0 817
ENST00000351293 CAMK2G-002 protein_coding Homo_sapiens 0 767
ENST00000372765 CAMK2G-004 protein_coding Homo_sapiens 0 610
ENST00000394762 CAMK2G-202 protein_coding Homo_sapiens 0 610
ENST00000398376 CAMK2A-002 protein_coding Homo_sapiens 0 2183
ENST00000423381 CAMK2G-203 protein_coding Homo_sapiens 0 627
ENST00000433289 CAMK2G-003 protein_coding Homo_sapiens 0 496
ENST00000441192 CAMK2G-010 protein_coding Homo_sapiens 0 244
ENST00000472912 CAMK2G-006 processed_transcript Homo_sapiens 0 398
ENST00000477652 CAMK2G-009 processed_transcript Homo_sapiens 0 379
ENST00000492020 CAMK2G-008 processed_transcript Homo_sapiens 0 239
ENST00000508662 CAMK2A-004 retained_intron Homo_sapiens 0 1254
ENST00000515758 CAMK2A-007 protein_coding Homo_sapiens 0 418

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