C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD6 antigen
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025572 Cd6-005 ENSMUSG00000024670 10090 - 19:10789346-10798744 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000025572
Transcript ID Adipose Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000025572 0.008±0.00 0.021±0.02 5.239±0.00 0.133±0.00 0.011±0.00 0.037±0.02 0.062±0.04 0.059±0.00 0.024±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313421 CD6-001 protein_coding Homo_sapiens 0 566
ENST00000344931 CD6-004 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000352009 CD6-008 protein_coding Homo_sapiens 0 348
ENST00000419282 CD6-016 retained_intron Homo_sapiens 0 193
ENST00000433107 CD6-006 protein_coding Homo_sapiens 0 237
ENST00000452451 CD6-007 protein_coding Homo_sapiens 0 237
ENST00000505761 CD6-014 retained_intron Homo_sapiens 0 252

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