C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD6 molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313421 CD6-001 ENSG00000013725 9606 + 11:60971680-61020377 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryPlacentaTestisENST00000313421
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000313421 6.570±0.00 0.310±0.06 0.134±0.00 0.105±0.01 2.648±2.49 1.247±0.00 0.442±0.18 0.237±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006898 IEA receptor-mediated endocytosis
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080292 Cd6-001 protein_coding Mus_musculus 0 1173
ENSMUST00000039043 Cd6-004 protein_coding Mus_musculus 0 736
ENSMUST00000025572 Cd6-005 retained_intron Mus_musculus 0 566
ENSMUST00000173613 Cd6-007 retained_intron Mus_musculus 0 196

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