C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 1 (cardiac muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025718 Ankrd1-201 ENSMUSG00000024803 10090 - 19:36111965-36119844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025718
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025718 0.034±0.01 1.157±0.37 0.042±0.01 0.177±0.03 0.269±0.05 216.707±117.87 0.493±0.14 0.165±0.13 9.266±4.50 2.465±0.61 0.165±0.06 0.838±0.22 0.032±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BY CIL_0008BY_0002 VISTA 19:35829039-36429586
CIL_0001IP CIL_0001IP_0002 CGP 19:36083716-36119844
CIL_0001IQ CIL_0001IQ_0002 CGP 19:36111965-36456192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001085 IEA RNA polymerase II transcription factor binding
GO:0001105 IEA RNA polymerase II transcription coactivator activity
GO:0002039 IEA p53 binding
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008134 IEA transcription factor binding
GO:0010976 IEA positive regulation of neuron projection development
GO:0030016 IDA myofibril
GO:0031432 IPI titin binding
GO:0031674 IDA I band
GO:0035690 IDA cellular response to drug
GO:0035914 IMP skeletal muscle cell differentiation
GO:0035994 IEA response to muscle stretch
GO:0042826 IEA histone deacetylase binding
GO:0043065 IEA positive regulation of apoptotic process
GO:0043517 IEA positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0050714 IEA positive regulation of protein secretion
GO:0055008 IEA cardiac muscle tissue morphogenesis
GO:0070412 IEA R-SMAD binding
GO:0071222 IDA cellular response to lipopolysaccharide
GO:0071260 IEA cellular response to mechanical stimulus
GO:0071347 IEA cellular response to interleukin-1
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071407 IEA cellular response to organic cyclic compound
GO:0071456 IEA cellular response to hypoxia
GO:0071560 IEA cellular response to transforming growth factor beta stimulus
GO:2000279 IEA negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371697 ANKRD1-001 protein_coding Homo_sapiens 0 1195

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