C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008BY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs495 VISTA 9606 10:90630264-91230917
GeneTranscriptPositionBiotype
ENSG00000148677 (ANKRD1)
ankyrin repeat domain 1 (cardiac muscle) 		ENST00000371697 (ANKRD1-001) 90912096-90921276 protein_coding
ENSG00000148680 (HTR7)
5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 		ENST00000277874 (HTR7-002) 90740823-90857698 protein_coding
ENST00000336152 (HTR7-001) 90740823-90857698 protein_coding
ENST00000371719 (HTR7-003) 90740823-90857698 protein_coding
ENSG00000148688 (RPP30)
ribonuclease P/MRP 30kDa subunit 		ENST00000277882 (RPP30-004) 90871983-90896392 protein_coding
ENST00000371703 (RPP30-001) 90871716-90902190 protein_coding
ENST00000413330 (RPP30-201) 90871952-90903262 protein_coding
ENST00000414836 (RPP30-006) 90875558-90900766 protein_coding
ENST00000466462 (RPP30-007) 90875604-90900847 processed_transcript
ENST00000470933 (RPP30-009) 90896326-90908553 processed_transcript
ENST00000479678 (RPP30-010) 90895668-90900766 processed_transcript
ENST00000480406 (RPP30-008) 90894773-90905638 processed_transcript
ENST00000487998 (RPP30-005) 90871973-90900762 retained_intron
ENST00000489806 (RPP30-003) 90894775-90906065 processed_transcript
ENSG00000180628 (PCGF5)
polycomb group ring finger 5 		ENST00000336126 (PCGF5-001) 91220788-91284331 protein_coding
ENST00000490164 (PCGF5-002) 91220783-91227960 processed_transcript
ENST00000496708 (PCGF5-003) 91220177-91222929 processed_transcript
ENST00000543648 (PCGF5-201) 91220151-91284329 protein_coding
ENST00000614189 (PCGF5-202) 91163012-91284329 protein_coding
ENSG00000220585 (DDX18P6)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 pseudogene 6 		ENST00000450119 (DDX18P6-001) 91053051-91055047 processed_pseudogene
ENSG00000222305 (Y_RNA)
Y RNA 		ENST00000410373 (Y_RNA.1-796) 90880040-90880179 misc_RNA
ENSG00000224851 (LINC00502)
long intergenic non-protein coding RNA 502 		ENST00000423621 (LINC00502-001) 91047166-91062159 lincRNA
ENSG00000225519 (RP11-236B18.2)
 ENST00000412362 (RP11-236B18.2-001) 90994620-91006390 lincRNA
ENSG00000234043 (RP11-56M3.1)
 ENST00000477230 (RP11-56M3.1-001) 91152605-91153349 processed_pseudogene
ENSG00000273124 (RP11-236B18.5)
 ENST00000607979 (RP11-236B18.5-001) 90997480-90997713 lincRNA
CIL_0008BY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs495 VISTA 10090 19:35829039-36429586
GeneTranscriptPositionBiotype
ENSMUSG00000024798 (Htr7)
5-hydroxytryptamine (serotonin) receptor 7 		ENSMUST00000099505 (Htr7-006) 35960315-36057373 protein_coding
ENSMUST00000164639 (Htr7-001) 35958734-36057340 protein_coding
ENSMUST00000164781 (Htr7-004) 35958734-36057360 nonsense_mediated_decay
ENSMUST00000165215 (Htr7-002) 35958734-36057360 nonsense_mediated_decay
ENSMUST00000166074 (Htr7-005) 35958745-36057368 protein_coding
ENSMUST00000170360 (Htr7-003) 35959820-36057507 nonsense_mediated_decay
ENSMUSG00000024800 (Rpp30)
ribonuclease P/MRP 30 subunit 		ENSMUST00000025714 (Rpp30-201) 36083716-36104772 protein_coding
ENSMUSG00000024803 (Ankrd1)
ankyrin repeat domain 1 (cardiac muscle) 		ENSMUST00000025718 (Ankrd1-201) 36111965-36119844 protein_coding
ENSMUSG00000024805 (Pcgf5)
polycomb group ring finger 5 		ENSMUST00000062389 (Pcgf5-201) 36409748-36456192 protein_coding
ENSMUST00000071267 (Pcgf5-202) 36379067-36456192 protein_coding
ENSMUSG00000094707 (A830019P07Rik)
RIKEN cDNA A830019P07 gene 		ENSMUST00000178904 (A830019P07Rik-001) 35835221-35924578 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BY_0001ENSG00000148677ENST00000371697ENSG00000148680ENST00000277874ENST00000336152ENST00000371719ENSG00000148688ENST00000277882ENST00000371703ENST00000413330ENST00000414836ENST00000466462ENST00000470933ENST00000479678ENST00000480406ENST00000487998ENST00000489806ENSG00000180628ENST00000336126ENST00000490164ENST00000496708ENST00000543648ENST00000614189ENSG00000220585ENST00000450119ENSG00000222305ENST00000410373ENSG00000224851ENST00000423621ENSG00000225519ENST00000412362ENSG00000234043ENST00000477230ENSG00000273124ENST00000607979CIL_0008BY_0002ENSMUSG00000024798ENSMUST00000099505ENSMUST00000164639ENSMUST00000164781ENSMUST00000165215ENSMUST00000166074ENSMUST00000170360ENSMUSG00000024800ENSMUST00000025714ENSMUSG00000024803ENSMUST00000025718ENSMUSG00000024805ENSMUST00000062389ENSMUST00000071267ENSMUSG00000094707ENSMUST00000178904
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148677 ENST00000371697 0.036±0.00 2.498±0.00 N/A 0.097±0.02 0.180±0.05 0.167±0.13 502.822±157.49 0.213±0.00 0.253±0.19 1.777±0.15 10.531±6.67 0.119±0.06 2.848±1.76 4.827±3.82
ENSG00000148680 ENST00000277874 0.053±0.00 0.174±0.00 0.027±0.00 0.113±0.03 0.113±0.00 0.211±0.11 0.070±0.00 0.101±0.00 0.045±0.00 0.063±0.00 N/A 0.106±0.03 0.098±0.07 2.853±0.27
ENST00000336152 N/A N/A N/A 0.608±0.00 0.403±0.00 N/A 0.024±0.00 N/A 0.620±0.00 N/A N/A 0.089±0.00 0.102±0.00 3.075±0.97
ENST00000371719 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A 0.005±0.00 0.599±0.00 N/A 0.142±0.00 0.120±0.00 5.273±4.50
ENSG00000148688 ENST00000277882 5.760±0.00 5.278±0.00 N/A N/A 6.813±0.00 4.544±0.00 2.333±0.00 N/A N/A N/A 5.801±0.00 N/A 4.457±0.00 12.431±0.00
ENST00000371703 0.823±0.00 N/A 0.441±0.00 N/A 0.708±0.00 0.720±0.00 0.518±0.00 N/A 0.395±0.00 0.574±0.00 0.584±0.00 0.736±0.17 1.215±0.58 N/A
ENST00000413330 N/A N/A N/A 4.585±0.00 6.473±0.00 3.852±0.00 2.812±0.00 3.132±2.18 2.181±0.89 2.872±0.20 1.515±0.00 4.514±0.98 5.540±1.13 3.858±0.00
ENST00000414836 2.925±0.00 8.276±0.00 N/A 4.406±0.00 7.523±0.00 4.897±0.00 3.401±0.00 7.820±0.00 2.716±0.00 5.105±0.00 2.880±0.00 4.300±0.02 5.743±0.00 15.754±0.00
ENST00000466462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.788±0.00 4.854±0.10 N/A
ENST00000470933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480406 N/A N/A N/A N/A N/A N/A N/A 1.114±0.00 1.836±0.00 N/A N/A N/A N/A N/A
ENST00000487998 N/A N/A N/A 2.125±0.00 1.495±0.00 1.739±0.00 1.299±0.00 1.351±0.00 2.482±0.00 1.250±0.00 N/A 1.315±0.67 N/A 1.575±0.00
ENST00000489806 1.288±0.00 2.904±0.00 N/A 2.829±0.00 2.988±0.00 2.135±0.00 0.600±0.00 3.041±0.00 0.796±0.00 N/A 1.001±0.00 1.701±0.70 1.386±0.26 6.636±0.00
ENSG00000180628 ENST00000336126 5.140±0.00 1.347±0.00 N/A N/A 1.856±0.00 N/A 3.047±0.00 1.510±0.00 N/A 1.601±0.00 N/A 2.127±0.28 1.524±0.33 5.389±2.11
ENST00000490164 N/A 10.999±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.596±0.00 5.004±0.26 8.482±4.07 N/A
ENST00000496708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.038±0.00
ENST00000614189 1.458±0.00 4.146±0.00 2.124±0.00 9.198±3.12 3.488±0.41 7.229±1.65 4.375±2.01 6.272±1.62 5.620±1.56 5.029±3.44 4.901±3.77 2.745±1.00 2.539±0.00 N/A
ENSG00000220585 ENST00000450119 N/A N/A N/A 0.006±0.00 0.011±0.00 N/A 0.010±0.00 0.011±0.00 N/A N/A N/A 0.005±0.00 N/A 0.011±0.00
ENSG00000222305 ENST00000410373 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A
ENSG00000224851 ENST00000423621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.391±0.05
ENSG00000225519 ENST00000412362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00
ENSG00000234043 ENST00000477230 0.088±0.00 0.440±0.00 0.220±0.00 0.243±0.06 0.111±0.00 0.085±0.00 0.330±0.13 0.222±0.00 0.113±0.10 0.228±0.00 N/A 0.164±0.09 0.362±0.16 0.983±0.44
ENSG00000273124 ENST00000607979 N/A N/A N/A N/A 0.152±0.00 N/A 0.108±0.00 N/A N/A N/A N/A N/A 0.253±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024798 ENSMUST00000099505 N/A 0.049±0.01 N/A N/A 0.297±0.09 0.143±0.10 0.039±0.01 N/A 0.025±0.01 0.071±0.02 N/A 0.134±0.06 0.004±0.00 0.041±0.02
ENSMUST00000164639 0.298±0.00 N/A 0.008±0.00 0.840±0.23 0.139±0.09 0.040±0.01 0.106±0.05 0.045±0.00 0.010±0.01 0.103±0.07 0.255±0.08 0.097±0.07 0.018±0.01 0.030±0.00
ENSMUST00000164781 N/A N/A N/A N/A 0.190±0.00 0.052±0.00 N/A 0.025±0.02 N/A N/A N/A 0.138±0.09 N/A N/A
ENSMUST00000165215 0.208±0.00 0.065±0.00 N/A 0.548±0.14 N/A 0.054±0.00 0.156±0.00 0.028±0.02 N/A N/A 0.387±0.00 0.027±0.00 N/A N/A
ENSMUST00000166074 0.165±0.00 N/A 0.086±0.00 0.626±0.10 0.052±0.00 N/A N/A N/A 0.001±0.00 N/A 0.148±0.00 0.003±0.00 0.002±0.00 N/A
ENSMUST00000170360 N/A 0.155±0.03 0.020±0.00 N/A 0.244±0.06 0.153±0.10 0.115±0.02 0.072±0.00 0.017±0.00 0.198±0.05 0.065±0.00 0.100±0.08 N/A 0.067±0.00
ENSMUSG00000024800 ENSMUST00000025714 3.077±0.71 0.538±0.18 9.313±0.85 8.628±4.65 1.764±0.67 0.687±0.16 3.443±0.15 2.438±0.42 6.880±6.15 2.443±0.88 5.782±0.50 2.498±1.84 9.172±5.04 12.649±3.54
ENSMUSG00000024803 ENSMUST00000025718 0.034±0.01 N/A 1.157±0.37 0.042±0.01 0.177±0.03 0.269±0.05 216.707±117.87 0.493±0.14 0.165±0.13 9.266±4.50 2.465±0.61 0.165±0.06 0.838±0.22 0.032±0.01
ENSMUSG00000024805 ENSMUST00000062389 3.653±0.49 2.047±1.09 6.585±0.52 2.038±1.26 4.061±0.79 3.224±1.05 13.865±1.54 3.833±1.20 3.451±2.76 3.949±1.75 4.507±0.50 2.610±0.88 32.828±10.65 14.164±6.41
ENSMUST00000071267 N/A 1.779±0.31 6.062±0.00 N/A N/A N/A N/A 0.880±0.00 2.080±0.79 1.396±0.00 N/A 1.833±0.69 23.412±7.61 N/A
ENSMUSG00000094707 ENSMUST00000178904 0.146±0.10 N/A 0.103±0.02 0.048±0.00 0.052±0.01 N/A 0.094±0.06 0.043±0.03 0.005±0.00 0.123±0.06 0.044±0.01 0.050±0.03 0.018±0.01 0.030±0.00

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