C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 1 (cardiac muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371697 ANKRD1-001 ENSG00000148677 9606 - 10:90912096-90921276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371697
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371697 0.036±0.00 2.498±0.00 0.097±0.02 0.180±0.05 0.167±0.13 502.822±157.49 0.213±0.00 0.253±0.19 1.777±0.15 10.531±6.67 0.119±0.06 2.848±1.76 4.827±3.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BY CIL_0008BY_0001 VISTA 10:90630264-91230917
CIL_0001IP CIL_0001IP_0001 CGP 10:90871716-90921276
CIL_0001IQ CIL_0001IQ_0001 CGP 10:90912096-91284331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0001105 IDA RNA polymerase II transcription coactivator activity
GO:0002039 IPI p53 binding
GO:0003677 IDA DNA binding
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008134 IEA transcription factor binding
GO:0010976 IEA positive regulation of neuron projection development
GO:0030016 IEA myofibril
GO:0031432 IPI titin binding
GO:0031674 ISS I band
GO:0035690 IEA cellular response to drug
GO:0035914 IEA skeletal muscle cell differentiation
GO:0035994 IMP response to muscle stretch
GO:0042826 IPI histone deacetylase binding
GO:0043065 IMP positive regulation of apoptotic process
GO:0043517 IDA positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045214 NAS sarcomere organization
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0050714 IMP positive regulation of protein secretion
GO:0055008 IMP cardiac muscle tissue morphogenesis
GO:0070412 IPI R-SMAD binding
GO:0071222 IDA cellular response to lipopolysaccharide
GO:0071260 IDA cellular response to mechanical stimulus
GO:0071347 IDA cellular response to interleukin-1
GO:0071356 IDA cellular response to tumor necrosis factor
GO:0071407 IEA cellular response to organic cyclic compound
GO:0071456 IEA cellular response to hypoxia
GO:0071560 IDA cellular response to transforming growth factor beta stimulus
GO:2000279 IMP negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025718 Ankrd1-201 protein_coding Mus_musculus 0 1195

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