C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COBW domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025815 Cbwd1-201 ENSMUSG00000024878 10090 - 19:24919916-24961616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025815 1.630±0.42 2.430±0.96 3.113±0.56 2.469±0.65 1.374±0.38 0.943±0.56 1.330±0.32 1.833±0.35 2.309±1.63 1.343±0.41 3.676±0.33 1.865±1.34 9.100±3.50 4.937±1.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AF CIL_0009AF_0002 VISTA 19:24645396-25246544
CIL_0000VT CIL_0000VT_0004 CGP 19:24898965-24961616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259199 CBWD2-001 protein_coding Homo_sapiens 0 1142
ENST00000314367 CBWD1-009 protein_coding Homo_sapiens 0 1092
ENST00000356521 CBWD1-008 protein_coding Homo_sapiens 0 1175
ENST00000358604 CBWD2-004 nonsense_mediated_decay Homo_sapiens 0 1064
ENST00000360171 CBWD3-001 protein_coding Homo_sapiens 0 1182
ENST00000377342 CBWD3-201 protein_coding Homo_sapiens 0 793
ENST00000377389 CBWD5-011 nonsense_mediated_decay Homo_sapiens 0 1090
ENST00000377391 CBWD7-005 protein_coding Homo_sapiens 0 1155
ENST00000377395 CBWD5-026 protein_coding Homo_sapiens 0 654
ENST00000377400 CBWD1-019 protein_coding Homo_sapiens 0 1175
ENST00000377447 CBWD1-017 protein_coding Homo_sapiens 0 739
ENST00000382404 CBWD5-003 retained_intron Homo_sapiens 0 734
ENST00000382405 CBWD5-001 protein_coding Homo_sapiens 0 1181
ENST00000382436 CBWD7-007 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000382447 CBWD1-012 protein_coding Homo_sapiens 0 784
ENST00000416503 CBWD2-201 protein_coding Homo_sapiens 0 750
ENST00000429800 CBWD5-023 protein_coding Homo_sapiens 0 660
ENST00000430059 CBWD5-008 protein_coding Homo_sapiens 0 787
ENST00000431099 CBWD1-016 processed_transcript Homo_sapiens 0 521
ENST00000433343 CBWD2-202 protein_coding Homo_sapiens 0 569
ENST00000456188 CBWD2-006 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000456520 CBWD7-001 protein_coding Homo_sapiens 0 776
ENST00000465474 CBWD5-024 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000467791 CBWD7-012 nonsense_mediated_decay Homo_sapiens 1.99965e-42 176
ENST00000469687 CBWD3-006 retained_intron Homo_sapiens 8e-37 159
ENST00000469921 CBWD5-018 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000485382 CBWD6-001 unprocessed_pseudogene Homo_sapiens 0 472
ENST00000486387 CBWD7-003 nonsense_mediated_decay Homo_sapiens 0 584
ENST00000487575 CBWD1-014 processed_transcript Homo_sapiens 3e-40 171
ENST00000492566 CBWD2-015 retained_intron Homo_sapiens 0 708
ENST00000495302 CBWD1-003 processed_transcript Homo_sapiens 0 351
ENST00000498044 CBWD1-013 processed_transcript Homo_sapiens 0 285
ENST00000610358 CBWD7-008 processed_transcript Homo_sapiens 7e-37 159
ENST00000611426 CBWD3-007 nonsense_mediated_decay Homo_sapiens 0 702
ENST00000612050 CBWD3-013 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000613125 CBWD7-006 processed_transcript Homo_sapiens 0 351
ENST00000613355 CBWD1-022 nonsense_mediated_decay Homo_sapiens 0 702
ENST00000613508 CBWD1-027 protein_coding Homo_sapiens 0 673
ENST00000613716 CBWD7-201 protein_coding Homo_sapiens 0 1064
ENST00000613988 CBWD1-020 retained_intron Homo_sapiens 0 702
ENST00000614398 CBWD3-012 processed_transcript Homo_sapiens 0 368
ENST00000615061 CBWD3-009 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000616550 CBWD3-202 protein_coding Homo_sapiens 0 590
ENST00000616944 CBWD1-023 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000617722 CBWD7-002 processed_transcript Homo_sapiens 0 492
ENST00000617933 CBWD7-202 protein_coding Homo_sapiens 0 584
ENST00000618061 CBWD1-028 nonsense_mediated_decay Homo_sapiens 5e-39 167
ENST00000618217 CBWD3-203 protein_coding Homo_sapiens 0 660
ENST00000618361 CBWD1-032 nonsense_mediated_decay Homo_sapiens 1e-39 167
ENST00000618921 CBWD3-015 processed_transcript Homo_sapiens 0 497
ENST00000619157 CBWD1-026 nonsense_mediated_decay Homo_sapiens 4e-23 113
ENST00000620292 CBWD1-031 retained_intron Homo_sapiens 0 285
ENST00000620776 CBWD7-017 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000621396 CBWD3-014 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000621474 CBWD3-010 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000622755 CBWD3-008 nonsense_mediated_decay Homo_sapiens 0 702
ENST00000622817 CBWD3-011 processed_transcript Homo_sapiens 1e-38 165

Loading