C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinol binding protein 4, plasma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025951 Rbp4-201 ENSMUSG00000024990 10090 - 19:38116620-38125321 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLungTestisENSMUST00000025951
Transcript ID Brain Colon Heart Kidney Lung Testis
ENSMUST00000025951 0.127±0.06 11.455±1.68 0.759±0.00 0.787±0.00 6.271±1.94 1.238±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000101 CIL_000101_0002 CGP 19:38097079-38125321
CIL_000102 CIL_000102_0002 CGP 19:38116620-38183947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001654 IMP eye development
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0006094 IMP gluconeogenesis
GO:0007283 IMP spermatogenesis
GO:0007507 IMP heart development
GO:0008584 IMP male gonad development
GO:0016918 IEA retinal binding
GO:0019841 IDA retinol binding
GO:0030277 IEA maintenance of gastrointestinal epithelium
GO:0030324 IMP lung development
GO:0032024 IEA positive regulation of insulin secretion
GO:0032526 IEA response to retinoic acid
GO:0032868 IMP response to insulin
GO:0034632 IMP retinol transporter activity
GO:0034633 IMP retinol transport
GO:0042572 IGI retinol metabolic process
GO:0042574 IMP retinal metabolic process
GO:0042593 IEA glucose homeostasis
GO:0043234 IEA protein complex
GO:0045471 IEA response to ethanol
GO:0046982 IEA protein heterodimerization activity
GO:0048562 IMP embryonic organ morphogenesis
GO:0048706 IMP embryonic skeletal system development
GO:0048738 IMP cardiac muscle tissue development
GO:0048807 IMP female genitalia morphogenesis
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0051024 IDA positive regulation of immunoglobulin secretion
GO:0060041 IMP retina development in camera-type eye
GO:0060044 IMP negative regulation of cardiac muscle cell proliferation
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye
GO:0060065 IMP uterus development
GO:0060068 IMP vagina development
GO:0060157 IMP urinary bladder development
GO:0060347 IMP heart trabecula formation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371464 RBP4-001 protein_coding Homo_sapiens 0 664
ENST00000371467 RBP4-003 protein_coding Homo_sapiens 0 664
ENST00000371469 RBP4-002 protein_coding Homo_sapiens 0 603
ENST00000615669 RBP4-201 protein_coding Homo_sapiens 0 641

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