C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000101_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186188-ENSG00000186188 CGP 9606 10:93566665-93604480
GeneTranscriptPositionBiotype
ENSG00000138207 (RBP4)
retinol binding protein 4, plasma 		ENST00000371464 (RBP4-001) 93591687-93601226 protein_coding
ENST00000371467 (RBP4-003) 93591687-93601663 protein_coding
ENST00000371469 (RBP4-002) 93591889-93601744 protein_coding
ENST00000615669 (RBP4-201) 93591844-93601203 protein_coding
ENSG00000186188 (FFAR4)
free fatty acid receptor 4 		ENST00000371481 (FFAR4-001) 93566665-93590072 protein_coding
ENST00000371483 (FFAR4-002) 93566665-93590072 protein_coding
ENST00000604414 (FFAR4-003) 93566682-93604480 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000101_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054200-ENSMUSG00000024990 CGP 10090 19:38097079-38125321
GeneTranscriptPositionBiotype
ENSMUSG00000024990 (Rbp4)
retinol binding protein 4, plasma 		ENSMUST00000025951 (Rbp4-201) 38116620-38125321 protein_coding
ENSMUST00000112335 (Rbp4-202) 38116620-38124811 protein_coding
ENSMUSG00000054200 (Ffar4)
free fatty acid receptor 4 		ENSMUST00000067098 (Ffar4-201) 38097079-38114263 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000101_0001ENSG00000138207ENST00000371464ENST00000371467ENST00000371469ENST00000615669ENSG00000186188ENST00000371481ENST00000371483ENST00000604414CIL_000101_0002ENSMUSG00000024990ENSMUST00000025951ENSMUST00000112335ENSMUSG00000054200ENSMUST00000067098
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000101_0001ENSG00000138207ENST00000371464ENST00000371467ENST00000371469ENST00000615669ENSG00000186188ENST00000371481ENST00000371483ENST00000604414CIL_000101_0002ENSMUSG00000024990ENSMUST00000025951ENSMUST00000112335ENSMUSG00000054200ENSMUST00000067098
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138207 ENST00000371464 66.174±0.00 0.583±0.00 4.830±0.00 2.996±1.53 99.574±93.08 0.529±0.00 1.198±0.00 216.826±213.60 8.186±0.00 1.919±0.00 0.286±0.00 4.970±5.10 10.748±2.86 1.066±0.75
ENST00000371467 N/A N/A N/A N/A 1.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.144±0.00 17.272±2.12 N/A
ENST00000615669 120.835±0.00 1.658±0.00 5.838±0.00 7.431±3.34 190.239±186.77 4.308±1.25 1.139±0.56 742.145±710.01 1822.071±1820.31 32.911±0.00 1.201±0.00 13.111±16.68 13.064±9.68 3.850±1.53
ENSG00000186188 ENST00000371481 0.316±0.00 0.266±0.00 N/A 0.255±0.00 2.450±0.04 0.614±0.07 0.079±0.01 0.110±0.00 0.149±0.10 0.400±0.25 0.011±0.00 0.303±0.34 0.119±0.03 0.239±0.00
ENST00000371483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00
ENST00000604414 N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A N/A 0.722±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024990 ENSMUST00000025951 N/A N/A N/A 0.127±0.06 N/A 11.455±1.68 0.759±0.00 0.787±0.00 N/A 6.271±1.94 N/A N/A N/A 1.238±0.17
ENSMUST00000112335 468.730±275.18 53.378±10.22 53.000±15.37 3.067±3.74 199.598±15.27 13.737±2.20 5.062±0.32 10.067±2.16 1905.513±901.18 11.658±3.01 1.573±0.97 26.137±9.40 351.915±442.35 3.665±1.68
ENSMUSG00000054200 ENSMUST00000067098 17.818±8.22 9.044±2.64 0.775±0.26 0.055±0.00 21.196±4.09 51.155±17.24 0.609±0.47 0.980±0.17 1.374±2.66 13.232±2.27 0.135±0.11 1.824±0.84 0.128±0.12 0.736±0.40

Loading