C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinol binding protein 4, plasma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615669 RBP4-201 ENSG00000138207 9606 - 10:93591844-93601203 protein_coding

Homo sapiens EnsemblGRCh38

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000615669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000615669 120.835±0.00 1.658±0.00 5.838±0.00 7.431±3.34 190.239±186.77 4.308±1.25 1.139±0.56 742.145±710.01 1822.071±1820.31 32.911±0.00 1.201±0.00 13.111±16.68 13.064±9.68 3.850±1.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068O CIL_00068O_0001 CGP 10:93496632-93604480
CIL_000101 CIL_000101_0001 CGP 10:93566665-93604480
CIL_000102 CIL_000102_0001 CGP 10:93591687-93666010

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0001654 ISS eye development
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 ISS extracellular space
GO:0005829 TAS cytosol
GO:0006094 ISS gluconeogenesis
GO:0007507 ISS heart development
GO:0007603 TAS phototransduction, visible light
GO:0016918 IEA retinal binding
GO:0019841 IDA retinol binding
GO:0030277 IDA maintenance of gastrointestinal epithelium
GO:0030324 ISS lung development
GO:0032024 IMP positive regulation of insulin secretion
GO:0032526 IDA response to retinoic acid
GO:0034632 IC retinol transporter activity
GO:0034633 IC retinol transport
GO:0042572 IMP retinol metabolic process
GO:0042593 IDA glucose homeostasis
GO:0048562 ISS embryonic organ morphogenesis
GO:0048706 ISS embryonic skeletal system development
GO:0048738 ISS cardiac muscle tissue development
GO:0048807 ISS female genitalia morphogenesis
GO:0051024 ISS positive regulation of immunoglobulin secretion
GO:0060044 ISS negative regulation of cardiac muscle cell proliferation
GO:0060059 ISS embryonic retina morphogenesis in camera-type eye
GO:0060065 ISS uterus development
GO:0060068 ISS vagina development
GO:0060157 ISS urinary bladder development
GO:0060347 ISS heart trabecula formation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112335 Rbp4-202 protein_coding Mus_musculus 0 654
ENSMUST00000025951 Rbp4-201 protein_coding Mus_musculus 0 641

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