C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026009 Arl3-201 ENSMUSG00000025035 10090 - 19:46531109-46573085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026009
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026009 19.471±1.21 10.056±0.66 33.563±2.70 108.409±75.70 9.179±3.38 5.133±0.92 7.602±1.38 28.604±4.83 15.838±8.82 16.833±1.30 12.813±1.60 27.215±28.37 20.937±8.01 184.826±73.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0002 VISTA 19:46318498-46919738
CIL_0001HP CIL_0001HP_0003 CGP 19:46501648-46573085
CIL_0001HQ CIL_0001HQ_0003 CGP 19:46531109-46596898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0001822 IMP kidney development
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005634 ISS nucleus
GO:0005794 ISS Golgi apparatus
GO:0005813 ISS centrosome
GO:0005876 ISS spindle microtubule
GO:0005881 ISS cytoplasmic microtubule
GO:0006184 IDA GTP catabolic process
GO:0006892 IEA post-Golgi vesicle-mediated transport
GO:0007224 IMP smoothened signaling pathway
GO:0007264 ISS small GTPase mediated signal transduction
GO:0008017 ISS microtubule binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0030496 ISS midbody
GO:0032391 ISS photoreceptor connecting cilium
GO:0042073 IMP intraciliary transport
GO:0042461 IMP photoreceptor cell development
GO:0046872 IEA metal ion binding
GO:0060271 ISS cilium morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0072372 ISS primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000105545 arl3-001 protein_coding Danio_rerio 0 344
ENST00000260746 ARL3-001 protein_coding Homo_sapiens 0 900

Loading