C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FUN14 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026016 Fundc1-001 ENSMUSG00000025040 10090 - X:17556564-17572325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026016 7.811±2.40 5.512±1.59 10.431±2.46 9.471±4.93 7.132±0.73 3.568±1.44 6.329±0.45 8.928±1.33 4.112±2.49 11.370±1.54 6.774±0.50 8.657±3.60 6.360±4.28 0.743±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SJ CIL_0001SJ_0003 CGP X:17132049-17572325
CIL_0005Q9 CIL_0005Q9_0002 CGP X:17556564-18146701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000422 ISS mitochondrion degradation
GO:0001666 ISO:ISS response to hypoxia
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005741 IEA mitochondrial outer membrane
GO:0031307 ISS integral component of mitochondrial outer membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378045 FUNDC1-001 protein_coding Homo_sapiens 0 837
ENST00000402155 RP11-420L9.2-001 processed_pseudogene Homo_sapiens 8.40779e-45 183
ENST00000483115 FUNDC1-002 processed_transcript Homo_sapiens 0 684

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