C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402155 RP11-420L9.2-001 ENSG00000219992 9606 + 6:3754099-3754840 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungOvaryPlacentaTestisENST00000402155
Transcript ID Adipose Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000402155 0.054±0.00 0.273±0.00 0.435±0.38 0.078±0.00 0.100±0.00 0.813±0.50 0.210±0.09 0.717±0.00 0.111±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IP CIL_0003IP_0001 CGP 6:3722614-3851317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142638 Fundc1-002 protein_coding Mus_musculus 8.40779e-45 183
ENSMUST00000127690 Fundc1-003 processed_transcript Mus_musculus 8.40779e-45 183
ENSMUST00000177213 Fundc1-005 protein_coding Mus_musculus 8.40779e-45 183
ENSMUST00000026016 Fundc1-001 protein_coding Mus_musculus 8.40779e-45 183

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